RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SNAI3Q3KNW1 292 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 RNLSQ5VYX0 342 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 ZNF544Q6NX49 715 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 ZNF101Q8IZC7 436 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 SPARTQ8N0X7 666 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 ZFP41Q8N8Y5 198 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 OR1J1Q8NGS3 322 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 RORBQ92753 470 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 OR5M11Q96RB7 305 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 SPOCK3Q9BQ16 436 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 MOB1AQ9H8S9 216 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 TRIM36Q9NQ86 728 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 FAM206AQ9NX38 181 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 KCNN3Q9UGI6 736 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 OR52A1Q9UKL2 312 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 SPEF1Q9Y4P9 236 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 COL12A1Q99715 3063 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 LRRK2Q5S007 2527 aa10.64□□□□□ -0.71
TRAIP-209ENST00000488860 HELZ2Q9BYK8 2649 aaKnown RBP10.64□□□□□ -0.71
TRAIP-209ENST00000488860 A0A087WXM4 84 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 C5orf63A6NC05 138 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 A6NNC1 897 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 E9PI62 339 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 GPRIN2O60269 458 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 SRSF10O75494 262 aaKnown RBP10.63□□□□□ -0.71
TRAIP-209ENST00000488860 PNPP00491 289 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 LALBAP00709 142 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 PLAUP00749 431 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 NGFP01138 241 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 DCTDP32321 178 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 GTF2A1P52655 376 aaPredicted RBP10.63□□□□□ -0.71
TRAIP-209ENST00000488860 UCP2P55851 309 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 PPP1CBP62140 327 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 TIGD6Q17RP2 521 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 WDR38Q5JTN6 314 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 XAF1Q6GPH4 301 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 UNQ6126/PRO20091Q6UXV3 157 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 ZNF367Q7RTV3 350 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 KCTD20Q7Z5Y7 419 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 ACBD4Q8NC06 268 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 OR8B12Q8NGG6 310 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 OR2AE1Q8NHA4 323 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 APOBEC3DQ96AK3 386 aaPredicted RBP10.63□□□□□ -0.71
TRAIP-209ENST00000488860 C1QTNF5Q9BXJ0 243 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 PBOV1Q9GZY1 135 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 OR10A2Q9H208 303 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 POFUT1Q9H488 388 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 SP140LQ9H930 580 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 ACOT13Q9NPJ3 140 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 PLEKHB1Q9UF11 243 aaPredicted RBP10.63□□□□□ -0.71
TRAIP-209ENST00000488860 FZR1Q9UM11 496 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 SLC22A13Q9Y226 551 aa10.63□□□□□ -0.71
TRAIP-209ENST00000488860 LSM2Q9Y333 95 aaKnown RBP10.63□□□□□ -0.71
TRAIP-209ENST00000488860 MAGEA13PA6NCF6 341 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 TRIM64A6NGJ6 449 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 SHISA9B4DS77 424 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 H3BSH0 61 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 ATE1O95260 518 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 SMIM18P0DKX4 95 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 PSMB9P28065 219 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 LOXP28300 417 aaPredicted RBP10.62□□□□□ -0.71
TRAIP-209ENST00000488860 PCSK6P29122 969 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 RAD52P43351 418 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 KIR3DL2P43630 455 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 MMP16P51512 607 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 PRSS12P56730 875 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 EMX1Q04741 257 aaPredicted RBP10.62□□□□□ -0.71
TRAIP-209ENST00000488860 MALLQ13021 153 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 MRPL28Q13084 256 aaKnown RBP10.62□□□□□ -0.71
TRAIP-209ENST00000488860 ALKBH1Q13686 389 aaKnown RBP10.62□□□□□ -0.71
TRAIP-209ENST00000488860 DOC2BQ14184 412 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 SPHARQ15513 63 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 GLYATL3Q5SZD4 288 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 RGS7BPQ6MZT1 257 aaPredicted RBP10.62□□□□□ -0.71
TRAIP-209ENST00000488860 ZNF704Q6ZNC4 412 aaPredicted RBP10.62□□□□□ -0.71
TRAIP-209ENST00000488860 KCTD8Q6ZWB6 473 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 CATSPERDQ86XM0 798 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 OR5L1Q8NGL2 311 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 OR2G2Q8NGZ5 317 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 SLC25A40Q8TBP6 338 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 NEUROG1Q92886 237 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 PPP1R14AQ96A00 147 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 BCL2L14Q9BZR8 327 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 VCX3AQ9NNX9 186 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 G6PC2Q9NQR9 355 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 TBCCD1Q9NVR7 557 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 BABAM2Q9NXR7 383 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 NUFIP1Q9UHK0 495 aaKnown RBP10.62□□□□□ -0.71
TRAIP-209ENST00000488860 STARD10Q9Y365 291 aa10.62□□□□□ -0.71
TRAIP-209ENST00000488860 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 RAI1Q7Z5J4 1906 aaPredicted RBP10.61□□□□□ -0.71
TRAIP-209ENST00000488860 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 P2RY10O00398 339 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 XRCC2O43543 280 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 TTRP02766 147 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 PCMT1P22061 227 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 NR4A1P22736 598 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 THBS4P35443 961 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 TAS2R43P59537 309 aa10.61□□□□□ -0.71
TRAIP-209ENST00000488860 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms