RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 LAMP3Q9UQV4 416 aa9.81□□□□□ -0.84
NUP50-216ENST00000486184 CRYBG3Q68DQ2 2970 aa9.81□□□□□ -0.84
NUP50-216ENST00000486184 TMEM269A0A1B0GVZ9 245 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 METTL15A6NJ78 407 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 B9A039 149 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 H3BSA7 217 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 SLC1A7O00341 560 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 XRCC2O43543 280 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 SULT1C4O75897 302 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 ATE1O95260 518 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 MT-ND5P03915 603 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 SLC2A1P11166 492 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 DNASE1P24855 282 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 DCKP27707 260 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 OTX1P32242 354 aaPredicted RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 ZNF121P58317 390 aaPredicted RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 KRTAP10-9P60411 292 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 PSMA6P60900 246 aaKnown RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 ERVS71-1P61550 626 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 TIGD6Q17RP2 521 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 GFOD2Q3B7J2 385 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 KRTAP27-1Q3LI81 207 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 C6orf141Q5SZD1 244 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 AHSA2Q719I0 299 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 FAM57BQ71RH2 274 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 MRPL21Q7Z2W9 205 aaKnown RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 OR52H1Q8NGJ2 320 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 OR52I1Q8NGK6 324 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 FBLIM1Q8WUP2 373 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 MYDGFQ969H8 173 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 PIGTQ969N2 578 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 TMEM80Q96HE8 168 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 SYT3Q9BQG1 590 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 ALG8Q9BVK2 526 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 OR10A2Q9H208 303 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 CXorf56Q9H5V9 222 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 FGF20Q9NP95 211 aaPredicted RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 DYNLRB1Q9NP97 96 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 PLCXD1Q9NUJ7 323 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 MRPS18AQ9NVS2 196 aaKnown RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 CNOT2Q9NZN8 540 aaKnown RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 FBXO9Q9UK97 447 aaPredicted RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 BLOC1S6Q9UL45 172 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 MYRFQ9Y2G1 1151 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 STARD10Q9Y365 291 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 EXOSC1Q9Y3B2 195 aaKnown RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 TPRKBQ9Y3C4 175 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 PMF1-BGLAPU3KQ54 211 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 RTTNQ86VV8 2226 aa9.8□□□□□ -0.84
NUP50-216ENST00000486184 ANKRD17O75179 2603 aaKnown RBP9.8□□□□□ -0.84
NUP50-216ENST00000486184 PLSCR5A0PG75 271 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 LOC110117498-PIK3R3F6TDL0 507 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 XPNPEP2O43895 674 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 TIMM8AO60220 97 aaPredicted RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 RPP14O95059 124 aaKnown RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 IGHA1P01876 353 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 ERCC1P07992 297 aaPredicted RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 PIPP12273 146 aaPredicted RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 DCTDP32321 178 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 ZNF85Q03923 595 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 ST3GAL4Q11206 333 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 GALEQ14376 348 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 EFNB3Q15768 340 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 NKPD1Q17RQ9 610 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 RSPO1Q2MKA7 263 aaPredicted RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 TP53I3Q53FA7 332 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 TMPRSS11AQ6ZMR5 421 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 SSX6Q7RTT6 188 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 KCTD20Q7Z5Y7 419 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 CDH24Q86UP0 819 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 LHFPL3Q86UP9 236 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 NAA40Q86UY6 237 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 COMMD2Q86X83 199 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 ZNF786Q8N393 782 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 KLF14Q8TD94 323 aaPredicted RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 NRGNQ92686 78 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 GGHQ92820 318 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 MARS2Q96GW9 593 aaKnown RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 MRPL37Q9BZE1 423 aaKnown RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 OPA3Q9H6K4 179 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 MOB1AQ9H8S9 216 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 ERVK13-1Q9NX77 482 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 MRM2Q9UI43 246 aaKnown RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 ST6GALNAC2Q9UJ37 374 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 DIMT1Q9UNQ2 313 aaKnown RBP9.79□□□□□ -0.84
NUP50-216ENST00000486184 PLEKHA6Q9Y2H5 1048 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 ROS1P08922 2347 aa9.79□□□□□ -0.84
NUP50-216ENST00000486184 UNC79Q9P2D8 2635 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 ACOD1A6NK06 481 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 PRR32B1ATL7 298 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 PTGES3LE9PB15 166 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 J3QLW9 94 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 J3QRE1 110 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 M0R233 179 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 MYL12BO14950 172 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 MAGEB4O15481 346 aaPredicted RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 DENRO43583 198 aaKnown RBP9.78□□□□□ -0.84
NUP50-216ENST00000486184 SOD3P08294 240 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 DANCRP0C864 163 aa9.78□□□□□ -0.84
NUP50-216ENST00000486184 RAC2P15153 192 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms