RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 TPRA1Q86W33 373 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 LRRC75A-AS1Q8N1F1 130 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 C11orf42Q8N5U0 333 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 ZNF565Q8N9K5 539 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 LILRB4Q8NHJ6 448 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 TCTEX1D2Q8WW35 142 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 RAPGEF5Q92565 580 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 SMIM14Q96QK8 99 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 SRXN1Q9BYN0 137 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 NXF5Q9H1B4 397 aaKnown RBP3.56□□□□□ -1.84
RFC4-212ENST00000479307 FANCEQ9HB96 536 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 C8orf4Q9NR00 106 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 B3GNT2Q9NY97 397 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 ONECUT1Q9UBC0 465 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 PLLPQ9Y342 182 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 PCLOQ9Y6V0 5065 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 CCDC88CQ9P219 2028 aa3.56□□□□□ -1.84
RFC4-212ENST00000479307 WNK1Q9H4A3 2382 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 SACSQ9NZJ4 4579 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 IGHV1OR15-1A0A075B7D0 117 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 TRAV17A0A0B4J275 112 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 C1orf232A0A0U1RR37 186 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 CXorf51AA0A1B0GTR3 108 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 A0A1B0GWB2 263 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 ZFP92A6NM28 416 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 ZNF705EA8MWA4 302 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 GOLGA8MH3BSY2 632 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 NDUFS8O00217 210 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 FCN1O00602 326 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 TAPBPO15533 448 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 PRKYO43930 277 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 KLF7O75840 302 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 ZMPSTE24O75844 475 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 LYPD3O95274 346 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 LALBAP00709 142 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 IGLV3-25P01717 112 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 HSPB1P04792 205 aaKnown RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 KLK3P07288 261 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 M6PRP20645 277 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 CAPZBP47756 277 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 PRKXP51817 358 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 ARFIP1P53367 373 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 CDH4P55283 916 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 VBP1P61758 197 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 POLR2GP62487 172 aaKnown RBP eCLIP3.55□□□□□ -1.84
RFC4-212ENST00000479307 UBE2IP63279 158 aaKnown RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 SPIBQ01892 262 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 EIF4EBP2Q13542 120 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 CUL2Q13617 745 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 MAJINQ3KP22 176 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 SPOPLQ6IQ16 392 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 C3orf62Q6ZUJ4 267 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 COMTD1Q86VU5 262 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 C14orf178Q8N769 122 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 CATSPER1Q8NEC5 780 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 STEAP2Q8NFT2 490 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 OR51G2Q8NGK0 314 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 OR5L2Q8NGL0 311 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 OR9A1PQ8NGU1 263 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 OR6K2Q8NGY2 324 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 RPL3LQ92901 407 aaKnown RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 ISG20Q96AZ6 181 aaKnown RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 EFHD2Q96C19 240 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 ZNF514Q96K75 400 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 MAGEB18Q96M61 343 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 AMDHD1Q96NU7 426 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 RPRD1AQ96P16 312 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 TGM7Q96PF1 710 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 TSC22D3Q99576 134 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 ZNF184Q99676 751 aaPredicted RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 SLC35A5Q9BS91 424 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 NIPSNAP3BQ9BS92 247 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 CNPY3Q9BT09 278 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 CHIAQ9BZP6 476 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 TM6SF2Q9BZW4 377 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 GLIPR2Q9H4G4 154 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 XKR8Q9H6D3 395 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 LRRC19Q9H756 370 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 ISG20L2Q9H9L3 353 aaKnown RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 CYP3A43Q9HB55 503 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 GLRX2Q9NS18 164 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 PIPOXQ9P0Z9 390 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 WARS2Q9UGM6 360 aaKnown RBP3.55□□□□□ -1.84
RFC4-212ENST00000479307 SLC17A4Q9Y2C5 497 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 CBY1Q9Y3M2 126 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 VWFP04275 2813 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 RYR1P21817 5038 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 ANKRD12Q6UB98 2062 aa3.55□□□□□ -1.84
RFC4-212ENST00000479307 PHF3Q92576 2039 aaKnown RBP3.54□□□□□ -1.84
RFC4-212ENST00000479307 USF3Q68DE3 2245 aa3.54□□□□□ -1.84
RFC4-212ENST00000479307 A0A0D9SEW6 157 aa3.54□□□□□ -1.84
RFC4-212ENST00000479307 TSPAN11A1L157 253 aa3.54□□□□□ -1.84
RFC4-212ENST00000479307 KLLNB2CW77 178 aa3.54□□□□□ -1.84
RFC4-212ENST00000479307 HCN1O60741 890 aa3.54□□□□□ -1.84
RFC4-212ENST00000479307 CRTAPO75718 401 aaPredicted RBP3.54□□□□□ -1.84
RFC4-212ENST00000479307 CD160O95971 181 aa3.54□□□□□ -1.84
RFC4-212ENST00000479307 RHOCP08134 193 aa3.54□□□□□ -1.84
RFC4-212ENST00000479307 UBTFL6P0CB48 400 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms