RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SLC16A9Q7RTY1 509 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 MDP1Q86V88 176 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 SKA3Q8IX90 412 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 SLC35F2Q8IXU6 374 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 APH1BQ8WW43 257 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 ZNRF4Q8WWF5 429 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 MOV10Q9HCE1 1003 aaKnown RBP12.44□□□□□ -0.42
USP11-207ENST00000478596 MRPL22Q9NWU5 206 aaKnown RBP12.44□□□□□ -0.42
USP11-207ENST00000478596 PLEK2Q9NYT0 353 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 BLOC1S6Q9UL45 172 aa12.44□□□□□ -0.42
USP11-207ENST00000478596 ARPC4-TTLL3A0A0A6YYG9 625 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 M0R1B8 84 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 ZNF593O00488 134 aaPredicted RBP12.43□□□□□ -0.42
USP11-207ENST00000478596 SGCEO43556 437 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 WBP4O75554 376 aaKnown RBP12.43□□□□□ -0.42
USP11-207ENST00000478596 PATE4P0C8F1 98 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 ZNF32P17041 273 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 GABRB1P18505 474 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 EEF1B2P24534 225 aaKnown RBP12.43□□□□□ -0.42
USP11-207ENST00000478596 HTR5AP47898 357 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
USP11-207ENST00000478596 ISL1P61371 349 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 ACTC1P68032 377 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 ACTA1P68133 377 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 CDK5R2Q13319 367 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 ENDOGQ14249 297 aaKnown RBP12.43□□□□□ -0.42
USP11-207ENST00000478596 SLC25A30Q5SVS4 291 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 LINC01590Q5TEZ4 76 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 SLC18B1Q6NT16 456 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 AHSA2Q719I0 299 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 SPATC1Q76KD6 591 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 DPY19L4Q7Z388 723 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 DCXRQ7Z4W1 244 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 GLCCI1Q86VQ1 547 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 ALDH16A1Q8IZ83 802 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 STX19Q8N4C7 294 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 MRPL48Q96GC5 212 aaKnown RBP12.43□□□□□ -0.42
USP11-207ENST00000478596 COPS4Q9BT78 406 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 IKZF2Q9UKS7 526 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 FBXL3Q9UKT7 428 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 TMEM14AQ9Y6G1 99 aa12.43□□□□□ -0.42
USP11-207ENST00000478596 EFCAB10A6NFE3 127 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 B4DSR2 109 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 SLC1A7O00341 560 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 PHYHO14832 338 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 XPNPEP2O43895 674 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 FADS2O95864 444 aaKnown RBP12.42□□□□□ -0.42
USP11-207ENST00000478596 SCG5P05408 212 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 LYNP07948 512 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 HOXB1P14653 301 aaPredicted RBP12.42□□□□□ -0.42
USP11-207ENST00000478596 MYL12AP19105 171 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 APLNRP35414 380 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 RAB1AP62820 205 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 EFNB1P98172 346 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 KCNMB1Q16558 191 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 KLHL22Q53GT1 634 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 ZNF627Q7L945 461 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 TIGD4Q8IY51 512 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 GJC3Q8NFK1 279 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 OR4F15Q8NGB8 312 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 AKR7LQ8NHP1 331 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 YIPF3Q9GZM5 350 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 C1orf198Q9H425 327 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 HEATR1Q9H583 2144 aaKnown RBP12.42□□□□□ -0.42
USP11-207ENST00000478596 ADGRL4Q9HBW9 690 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 CENPMQ9NSP4 180 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
USP11-207ENST00000478596 TPRKBQ9Y3C4 175 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 TIMM10BQ9Y5J6 103 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 LHFPL6Q9Y693 200 aa12.42□□□□□ -0.42
USP11-207ENST00000478596 DAPL1A0PJW8 107 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 RER1O15258 196 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 DENRO43583 198 aaKnown RBP12.41□□□□□ -0.42
USP11-207ENST00000478596 PTHP01270 115 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 SBK2P0C263 348 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 EPHA1P21709 976 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 CCNOP22674 350 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 HSD11B1P28845 292 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 RAB40BQ12829 278 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 RAB39AQ14964 217 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 TBC1D28Q2M2D7 210 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 PABPC1L2AQ5JQF8 200 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 C6orf141Q5SZD1 244 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 ZNF774Q6NX45 483 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 CFAP77Q6ZQR2 320 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 KRT77Q7Z794 578 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.41□□□□□ -0.42
USP11-207ENST00000478596 ZNF454Q8N9F8 522 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 LGALS12Q96DT0 336 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 FBXO17Q96EF6 278 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 MNTQ99583 582 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 SUCNR1Q9BXA5 334 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 OR2H1Q9GZK4 316 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 CCDC90BQ9GZT6 254 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 HDHD2Q9H0R4 259 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 CDH20Q9HBT6 801 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 LRCH1Q9Y2L9 728 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms