RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 FAM157AC9JC47 383 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 C11orf98E9PRG8 122 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 H3BNX3 289 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 BHLHE40O14503 412 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 ARPC3O15145 178 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 RNF13O43567 381 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 AHCYL1O43865 530 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 FKBP6O75344 327 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 TRMUO75648 421 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 RAD51DO75771 328 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 IL1AP01583 271 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 IGHG1P01857 330 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 SAGP10523 405 aaPredicted RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 AHCYP23526 432 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 IL32P24001 234 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 NR1H2P55055 460 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 BIDP55957 195 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 ACTR3P61158 418 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 RPL27P61353 136 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 ROR2Q01974 943 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 TGFBR3Q03167 851 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 CHRNB3Q05901 458 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 TSPAN31Q12999 210 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 C1DQ13901 141 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 MELKQ14680 651 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 PPA1Q15181 289 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 ZBED5Q49AG3 693 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 FAM98BQ52LJ0 330 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 FGD3Q5JSP0 725 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 SLC25A47Q6Q0C1 308 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 PAMR1Q6UXH9 720 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 RASSF6Q6ZTQ3 369 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 OAFQ86UD1 273 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 MEX3DQ86XN8 651 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 CDC20BQ86Y33 519 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 LINC00471Q8N535 108 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 ARIH2OSQ8N7S6 290 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 DNAAF1Q8NEP3 725 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 OR9Q2Q8NGE9 314 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 OR52J3Q8NH60 311 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 LILRB1Q8NHL6 650 aaPredicted RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 FNDC8Q8TC99 324 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 RAB40AQ8WXH6 277 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 HTRA1Q92743 480 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 HDAC2Q92769 488 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 NABP1Q96AH0 204 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 TNFRSF13CQ96RJ3 184 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 DDOQ99489 341 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 EMC6Q9BV81 110 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 KATNB1Q9BVA0 655 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 NOX3Q9HBY0 568 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 TMEM38BQ9NVV0 291 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 B3GNT2Q9NY97 397 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 IL20Q9NYY1 176 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 GLTPQ9NZD2 209 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 C6orf203Q9P0P8 240 aaPredicted RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 AMDHD2Q9Y303 409 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 RRP15Q9Y3B9 282 aaKnown RBP4.5□□□□□ -1.69
VPS45-207ENST00000477558 ADAM18Q9Y3Q7 739 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 CDH10Q9Y6N8 788 aa4.5□□□□□ -1.69
VPS45-207ENST00000477558 ACANP16112 2415 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 A0A1W2PRG6 482 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 PRSS37A4D1T9 235 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 A6NIZ1 184 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 SHISA9B4DS77 424 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 BLOC1S5-TXNDC5H3BN57 136 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 M0R3G1 203 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 TNFRSF11BO00300 401 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 IMPA2O14732 288 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 SLC25A17O43808 307 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 MGRN1O60291 552 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 TMCC2O75069 709 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 NDUFB2O95178 105 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 OR6A2O95222 327 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 BCL10O95999 233 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 HIST1H2ABP04908 130 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 MMP7P09237 267 aaPredicted RBP4.49□□□□□ -1.69
VPS45-207ENST00000477558 NR2C1P13056 603 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 PAX1P15863 534 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 ACADSP16219 412 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 CSNK1A1P48729 337 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 RAP1BP61224 184 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 RAP1AP62834 184 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 MRPS34P82930 218 aaKnown RBP4.49□□□□□ -1.69
VPS45-207ENST00000477558 ARF1P84077 181 aaKnown RBP4.49□□□□□ -1.69
VPS45-207ENST00000477558 CAMK2DQ13557 499 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 TWIST1Q15672 202 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 ATP6AP1Q15904 470 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 ZSCAN26Q16670 478 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 MICAQ29983 383 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 CEACAM16Q2WEN9 425 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 RFX4Q33E94 735 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 ZNF260Q3ZCT1 412 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 HIKESHIQ53FT3 197 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 Q5PR19 223 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 GPR139Q6DWJ6 353 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 RPL13AP3Q6NVV1 102 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 FAHD1Q6P587 224 aa4.49□□□□□ -1.69
VPS45-207ENST00000477558 SHQ1Q6PI26 577 aaKnown RBP4.49□□□□□ -1.69
VPS45-207ENST00000477558 SMARCD3Q6STE5 483 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms