RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ANGPTL7O43827 346 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 SCRN3Q0VDG4 424 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 DCTN2Q13561 401 aaKnown RBP12.4□□□□□ -0.42
SMG5-204ENST00000476954 GCNT6Q5T4J0 391 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 REEP3Q6NUK4 255 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 GCSAMQ8N6F7 178 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 FAM216BQ8N7L0 139 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 ADAMTS16Q8TE57 1224 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 DPF1Q92782 380 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 ITCHQ96J02 903 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 ZNF583Q96ND8 569 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 SORT1Q99523 831 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 CPPED1Q9BRF8 314 aaPredicted RBP12.4□□□□□ -0.42
SMG5-204ENST00000476954 ALG12Q9BV10 488 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 PAIP1Q9H074 479 aaKnown RBP12.4□□□□□ -0.42
SMG5-204ENST00000476954 TXNIPQ9H3M7 391 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 MUC13Q9H3R2 512 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 C1orf123Q9NWV4 160 aa12.4□□□□□ -0.42
SMG5-204ENST00000476954 GMNCA6NCL1 334 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 H7C1C5 153 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 SDHDO14521 159 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 PEX14O75381 377 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 OR7A10O76100 309 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 IL6P05231 212 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 GUCA1AP43080 201 aaPredicted RBP12.39□□□□□ -0.43
SMG5-204ENST00000476954 RGS6P49758 472 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 LCN6P62502 163 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 ACSM1Q08AH1 577 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 C11orf91Q3C1V1 193 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 CCDC92Q53HC0 331 aaPredicted RBP12.39□□□□□ -0.43
SMG5-204ENST00000476954 ADAMTSL5Q6ZMM2 481 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 ARMC8Q8IUR7 673 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 LINC00482Q8N8I6 264 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 OR5AU1Q8NGC0 362 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 OR1F12Q8NHA8 337 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 MEGF9Q9H1U4 602 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 PALMDQ9NP74 551 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 PNPOQ9NVS9 261 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 STX18Q9P2W9 335 aaKnown RBP12.39□□□□□ -0.43
SMG5-204ENST00000476954 KAAG1Q9UBP8 84 aa12.39□□□□□ -0.43
SMG5-204ENST00000476954 LSM4Q9Y4Z0 139 aaKnown RBP12.39□□□□□ -0.43
SMG5-204ENST00000476954 PRORSD1PA6NEY8 169 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 SERPINE1P05121 402 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 SELLP14151 372 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 HOXB9P17482 250 aaPredicted RBP12.38□□□□□ -0.43
SMG5-204ENST00000476954 CA6P23280 308 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 RPL14P50914 215 aaKnown RBP12.38□□□□□ -0.43
SMG5-204ENST00000476954 FADDQ13158 208 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 SLC2A7Q6PXP3 512 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 TMEM219Q86XT9 240 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 GPR32P1Q8NGA4 272 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 OR5L1Q8NGL2 311 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 C8orf46Q8TAG6 207 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 TFAP2CQ92754 450 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 APOBEC3DQ96AK3 386 aaPredicted RBP12.38□□□□□ -0.43
SMG5-204ENST00000476954 SEH1LQ96EE3 360 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 WDR55Q9H6Y2 383 aaPredicted RBP12.38□□□□□ -0.43
SMG5-204ENST00000476954 SLC25A37Q9NYZ2 338 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 RAP2CQ9Y3L5 183 aa12.38□□□□□ -0.43
SMG5-204ENST00000476954 RYR1P21817 5038 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 TRBV23-1A0A0A0MS06 115 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 TRAPPC13A5PLN9 417 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 SLC22A3O75751 556 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 ZFPL1O95159 310 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 TSPAN19P0C672 248 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 NR2C1P13056 603 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 RAB13P51153 203 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 ABCE1P61221 599 aaKnown RBP12.37□□□□□ -0.43
SMG5-204ENST00000476954 RPL27P61353 136 aaKnown RBP12.37□□□□□ -0.43
SMG5-204ENST00000476954 IKZF1Q13422 519 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 SCARB2Q14108 478 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 DUSP7Q16829 419 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 PLA1AQ53H76 456 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 WDR38Q5JTN6 314 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 MSRB3Q8IXL7 192 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 OR9I1Q8NGQ6 314 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 GTF2H4Q92759 462 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 TRIM36Q9NQ86 728 aa12.37□□□□□ -0.43
SMG5-204ENST00000476954 NKX1-2Q9UD57 310 aaPredicted RBP12.37□□□□□ -0.43
SMG5-204ENST00000476954 PRPF19Q9UMS4 504 aaKnown RBP12.37□□□□□ -0.43
SMG5-204ENST00000476954 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 TLDC2A0PJX2 215 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 NPIPB13A6NJU9 1138 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 NPIPB4C9JG80 1138 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 H0YHG0 523 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 J3QW42 95 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 RER1O15258 196 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 SYNGR1O43759 233 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 PTBP3O95758 552 aaKnown RBP12.36□□□□□ -0.43
SMG5-204ENST00000476954 MT-ND1P03886 318 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 AMY2BP19961 511 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 BLCAPP62952 87 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 GK2Q14410 553 aaPredicted RBP12.36□□□□□ -0.43
SMG5-204ENST00000476954 OR8G1Q15617 311 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 TEX36Q5VZQ5 186 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 LIAT1Q6ZQX7 453 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 DTX3Q8N9I9 347 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 Q8NFD4 153 aa12.36□□□□□ -0.43
SMG5-204ENST00000476954 LRRC8CQ8TDW0 803 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms