RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HOXC4P09017 264 aaPredicted RBP7.51□□□□□ -1.21
VAPB-205ENST00000476395 FOLR2P14207 255 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 ACTA2P62736 377 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 ACTG2P63267 376 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CLN3Q13286 438 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 OR2F1Q13607 317 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 EIF2B1Q14232 305 aaKnown RBP7.51□□□□□ -1.21
VAPB-205ENST00000476395 MEF2DQ14814 521 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 KIR2DS3Q14952 304 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 SHHQ15465 462 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CD226Q15762 336 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 FAM166AQ6J272 317 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 STEAP1BQ6NZ63 245 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CDC20BQ86Y33 519 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 WDFY1Q8IWB7 410 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 PRR18Q8N4B5 295 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 HSPA12BQ96MM6 686 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 LRFN5Q96NI6 719 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 GABRG3Q99928 467 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 TOLLIPQ9H0E2 274 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CYTL1Q9NRR1 136 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CSAG2Q9Y5P2 127 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 A0A1B0GTI1 187 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 RNASEK-C17orf49H0YIS7 233 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 H0YIZ8 118 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 TCAPO15273 167 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 NDUFB2O95178 105 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CD8AP01732 235 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 STAG3L3P0CL85 134 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 OR8G3PP0DMU2 310 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CD96P40200 585 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 KIR3DL2P43630 455 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 RAB2AP61019 212 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 IGLV3-21P80748 117 aaPredicted RBP7.51□□□□□ -1.21
VAPB-205ENST00000476395 PJVKQ0ZLH3 352 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 AIMP2Q13155 320 aaKnown RBP7.51□□□□□ -1.21
VAPB-205ENST00000476395 PPP1R1AQ13522 171 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 PARM1Q6UWI2 310 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 DPY19L2P2Q6ZN68 376 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 PGAP1Q75T13 922 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 ZSCAN4Q8NAM6 433 aaPredicted RBP7.51□□□□□ -1.21
VAPB-205ENST00000476395 DCUN1D4Q92564 292 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 EGLN1Q9GZT9 426 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 PDE7BQ9NP56 450 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 GDE1Q9NZC3 331 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 COMMD9Q9P000 198 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 CACFD1Q9UGQ2 172 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 VSIG4Q9Y279 399 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 ZNF281Q9Y2X9 895 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 AMDHD2Q9Y303 409 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 SLCO1B1Q9Y6L6 691 aa7.51□□□□□ -1.21
VAPB-205ENST00000476395 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 C9orf170A2RU37 121 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 A8MXE2 369 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SOX15O60248 233 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 OR10H2O60403 315 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CTAG2O75638 210 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 TXNDC12O95881 172 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CSTAP01040 98 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 OR8U9P0C7N5 309 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CDC34P49427 236 aaPredicted RBP7.5□□□□□ -1.21
VAPB-205ENST00000476395 PRKXP51817 358 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 AFF3P51826 1226 aaKnown RBP7.5□□□□□ -1.21
VAPB-205ENST00000476395 MPPED2Q15777 294 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ISXQ2M1V0 245 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 MESTQ5EB52 335 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CLEC9AQ6UXN8 241 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ZNF595Q8IYB9 648 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CLEC1AQ8NC01 280 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SLC24A4Q8NFF2 622 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 OR8U1Q8NH10 309 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 TCTEX1D2Q8WW35 142 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 LIPHQ8WWY8 451 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 MCHR2Q969V1 340 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ZFYVE21Q9BQ24 234 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 KXD1Q9BQD3 176 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CST11Q9H112 138 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SEC61A2Q9H9S3 476 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ZDHHC8Q9ULC8 765 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 TMED7Q9Y3B3 224 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 COLEC10Q9Y6Z7 277 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 OR4C45A6NMZ5 311 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 M0R036 132 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 AP4M1O00189 453 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SLC31A2O15432 143 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ZNF208O43345 1280 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 LRP3O75074 770 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 FBXO24O75426 580 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 RDH16O75452 317 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ITGB2P05107 769 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ASAH2BP0C7U1 165 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 RAB5AP20339 215 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 AGTR1P30556 359 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ULK3Q6PHR2 472 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CBLN3Q6UW01 205 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ENPP7Q6UWV6 458 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 PARGQ86W56 976 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 GABRG1Q8N1C3 465 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ZNF561Q8N587 486 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ZNF615Q8N8J6 731 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms