RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 OR9Q1Q8NGQ5 310 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 DDX28Q9NUL7 540 aaKnown RBP11.84□□□□□ -0.51
UPF3A-204ENST00000475218 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
UPF3A-204ENST00000475218 U3KQV3 271 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 NBEAL1Q6ZS30 2694 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 J3QLI3 93 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 ACOT8O14734 319 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 CCNB2O95067 398 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 ZNF205O95201 554 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 SOX14O95416 240 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 HLA-DQA2P01906 255 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 HLA-DPB1P04440 258 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 CLUP10909 449 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 HOXA4Q00056 320 aaPredicted RBP11.84□□□□□ -0.51
UPF3A-204ENST00000475218 CRMP1Q14194 572 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 PCK2Q16822 640 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 SLC36A3Q495N2 470 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 OR2T5Q6IEZ7 315 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 SHQ1Q6PI26 577 aaKnown RBP11.84□□□□□ -0.51
UPF3A-204ENST00000475218 PEG10Q86TG7 708 aaKnown RBP11.84□□□□□ -0.51
UPF3A-204ENST00000475218 DHFR2Q86XF0 187 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 ARHGAP24Q8N264 748 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 ATG16L2Q8NAA4 619 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 OR13G1Q8NGZ3 307 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 OR2T29Q8NH02 315 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 ZNF582Q96NG8 517 aaPredicted RBP11.84□□□□□ -0.51
UPF3A-204ENST00000475218 ARMC1Q9NVT9 282 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 TAS2R1Q9NYW7 299 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 COMMD3-BMI1R4GMX3 469 aa11.84□□□□□ -0.51
UPF3A-204ENST00000475218 PPIAL4EA0A075B759 164 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 A0A0A6YYJ9 748 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 PPIAL4CA0A0B4J2A2 164 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 PPIAL4DF5H284 164 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 CYB5R3P00387 301 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-204ENST00000475218 GYPBP06028 91 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 PPIAL4FP0DN26 164 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 PAX2Q02962 417 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 ECH1Q13011 328 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 MAB21L1Q13394 359 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 SNCBQ16143 134 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 MICAQ29983 383 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 FAM201AQ5SY85 155 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 RPL13AP3Q6NVV1 102 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 LINC00471Q8N535 108 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 ZNF511Q8NB15 262 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 OR52L1Q8NGH7 329 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 DVL3Q92997 716 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-204ENST00000475218 NIPSNAP1Q9BPW8 284 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 TSSK6Q9BXA6 273 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 HCAR1Q9BXC0 346 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 DGCR6LQ9BY27 220 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 MUC13Q9H3R2 512 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 C7orf69Q9H7B7 122 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 ESM1Q9NQ30 184 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 KCNG2Q9UJ96 466 aa11.83□□□□□ -0.52
UPF3A-204ENST00000475218 CEACAM18A8MTB9 384 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 A8MXK9 166 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 SURF4O15260 269 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 CALB2P22676 271 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 LINC01590Q5TEZ4 76 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 TMEM179BQ7Z7N9 219 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 MOGAT3Q86VF5 341 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 ADGRG5Q8IZF4 528 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 CCDC197Q8NCU1 140 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 PROKR2Q8NFJ6 384 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 OR2AJ1Q8NGZ0 328 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 DACT3Q96B18 629 aaPredicted RBP11.82□□□□□ -0.52
UPF3A-204ENST00000475218 CDADC1Q9BWV3 514 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 TMEM165Q9HC07 324 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 TBC1D23Q9NUY8 699 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 SAMHD1Q9Y3Z3 626 aaKnown RBP11.82□□□□□ -0.52
UPF3A-204ENST00000475218 M0R135 149 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 FOXH1O75593 365 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 LCATP04180 440 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 WNT2P09544 360 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 GATA3P23771 443 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 SLC25A1P53007 311 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 RAD23AP54725 363 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 HILS1P60008 231 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 ZNF92Q03936 586 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
UPF3A-204ENST00000475218 SLC27A4Q6P1M0 643 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 DCXRQ7Z4W1 244 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 SPICQ8N5J4 248 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 ST7LQ8TDW4 575 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 SLCO4A1Q96BD0 722 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 CCDC124Q96CT7 223 aaKnown RBP11.82□□□□□ -0.52
UPF3A-204ENST00000475218 ASB9Q96DX5 294 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 ZNF799Q96GE5 643 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 SLC6A7Q99884 636 aa11.82□□□□□ -0.52
UPF3A-204ENST00000475218 PRPF19Q9UMS4 504 aaKnown RBP11.82□□□□□ -0.52
UPF3A-204ENST00000475218 ZNF12P17014 697 aa11.81□□□□□ -0.52
UPF3A-204ENST00000475218 SPI1P17947 270 aa11.81□□□□□ -0.52
UPF3A-204ENST00000475218 MDH2P40926 338 aaKnown RBP11.81□□□□□ -0.52
UPF3A-204ENST00000475218 GATA4P43694 442 aa11.81□□□□□ -0.52
UPF3A-204ENST00000475218 MPPED2Q15777 294 aa11.81□□□□□ -0.52
UPF3A-204ENST00000475218 CD300LDQ6UXZ3 194 aa11.81□□□□□ -0.52
UPF3A-204ENST00000475218 USP43Q70EL4 1123 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms