RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 ANKRA2Q9H9E1 313 aa2.53□□□□□ -2
SDHB-204ENST00000475049 FAM49BQ9NUQ9 324 aa2.53□□□□□ -2
SDHB-204ENST00000475049 TMED5Q9Y3A6 229 aa2.53□□□□□ -2
SDHB-204ENST00000475049 ARID1AO14497 2285 aa2.53□□□□□ -2
SDHB-204ENST00000475049 FBN3Q75N90 2809 aa2.53□□□□□ -2
SDHB-204ENST00000475049 COL4A5P29400 1685 aa2.53□□□□□ -2
SDHB-204ENST00000475049 KIF1AQ12756 1690 aa2.53□□□□□ -2
SDHB-204ENST00000475049 TET2Q6N021 2002 aaPredicted RBP2.52□□□□□ -2.01
SDHB-204ENST00000475049 HTTP42858 3142 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 ELP1O95163 1332 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 CCDC171Q6TFL3 1326 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 IGLV4-60A0A075B6I1 120 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 IGHV3-74A0A0B4J1X5 117 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SPECC1L-ADORA2AF8WAN1 911 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 RETP07949 1114 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 PABPC4LP0CB38 370 aaKnown RBP2.52□□□□□ -2.01
SDHB-204ENST00000475049 RAB3BP20337 219 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 U2AF2P26368 475 aaKnown RBP eCLIP2.52□□□□□ -2.01
SDHB-204ENST00000475049 AQP2P41181 271 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SLC1A1P43005 524 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SLC25A11Q02978 314 aaKnown RBP2.52□□□□□ -2.01
SDHB-204ENST00000475049 WDR43Q15061 677 aaKnown RBP eCLIP2.52□□□□□ -2.01
SDHB-204ENST00000475049 RGNQ15493 299 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SOHLH1Q5JUK2 328 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SPECC1LQ69YQ0 1117 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 DNAJC24Q6P3W2 148 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SMIM5Q71RC9 77 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SLC16A14Q7RTX9 510 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 MMAAQ8IVH4 418 aaKnown RBP2.52□□□□□ -2.01
SDHB-204ENST00000475049 TTC5Q8N0Z6 440 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 FAM81AQ8TBF8 368 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 SYNPRQ8TBG9 265 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 ACMSDQ8TDX5 336 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 ITFG2Q969R8 447 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 ECHDC3Q96DC8 303 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 PDXPQ96GD0 296 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 C20orf24Q9BUV8 137 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 HRASLS2Q9NWW9 162 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 CTSFQ9UBX1 484 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 TRMT112Q9UI30 125 aaKnown RBP2.52□□□□□ -2.01
SDHB-204ENST00000475049 PSG8Q9UQ74 426 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 ST3GAL6Q9Y274 331 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 ATP6V1DQ9Y5K8 247 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 CDC42BPGQ6DT37 1551 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 LRP4O75096 1905 aa2.52□□□□□ -2.01
SDHB-204ENST00000475049 LTN1O94822 1766 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 RIF1Q5UIP0 2472 aaKnown RBP2.51□□□□□ -2.01
SDHB-204ENST00000475049 CEP250Q9BV73 2442 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CDC42BPAQ5VT25 1732 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 SBNO1A3KN83 1393 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 ANKRD36BQ8N2N9 1353 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 BPTFQ12830 3046 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 USP54Q70EL1 1684 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 HECTD1Q9ULT8 2610 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 RTL8CO15255 209 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 B4GALT5O43286 388 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 SMC2O95347 1197 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CTDNEP1O95476 244 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 AGTP01019 485 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 BCHEP06276 602 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CCNB1P14635 433 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 F2RP25116 425 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 DCKP27707 260 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CEACAM3P40198 252 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CSNK1EP49674 416 aaKnown RBP2.51□□□□□ -2.01
SDHB-204ENST00000475049 RGS8P57771 180 aaPredicted RBP2.51□□□□□ -2.01
SDHB-204ENST00000475049 LINC00315P59091 139 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 EIF3EP60228 445 aaKnown RBP2.51□□□□□ -2.01
SDHB-204ENST00000475049 ARG2P78540 354 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 MXD1Q05195 221 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 FAM83EQ2M2I3 478 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 KRTAP13-3Q3SY46 172 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 LINC00483Q53H64 154 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 LY6G6FQ5SQ64 297 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 AP1ARQ63HQ0 302 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 LRRC66Q68CR7 880 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 NANOGP8Q6NSW7 305 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 REEP3Q6NUK4 255 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 ARL9Q6T311 187 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CERS6Q6ZMG9 384 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 BIVMQ86UB2 503 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CMTM1Q8IZ96 169 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 BBS5Q8N3I7 341 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 GTPBP8Q8N3Z3 284 aaPredicted RBP2.51□□□□□ -2.01
SDHB-204ENST00000475049 PRELID2Q8N945 189 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 OR4A4PQ8NGN8 299 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 DNAJC1Q96KC8 554 aaKnown RBP2.51□□□□□ -2.01
SDHB-204ENST00000475049 PARP12Q9H0J9 701 aaKnown RBP2.51□□□□□ -2.01
SDHB-204ENST00000475049 ZNF160Q9HCG1 818 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 SLIT3O75094 1523 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 MYO10Q9HD67 2058 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 PRXQ9BXM0 1461 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CASKIN1Q8WXD9 1431 aa2.51□□□□□ -2.01
SDHB-204ENST00000475049 CNOT1A5YKK6 2376 aaKnown RBP2.5□□□□□ -2.01
SDHB-204ENST00000475049 ERICH4A6NGS2 130 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 GOLGA6L10A6NI86 522 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 OR2AG2A6NM03 316 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 TCP11X1B4DZS4 312 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 SIRPB1O00241 398 aa2.5□□□□□ -2.01
SDHB-204ENST00000475049 POLR3GO15318 223 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms