RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RAB22AQ9UL26 194 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 FLVCR1Q9Y5Y0 555 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 CACNA1IQ9P0X4 2223 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 A0A1B0GV90 55 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 KAT7O95251 611 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 SFT2D2O95562 160 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 TIMP1P01033 207 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 IFNA2P01563 188 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 GUSBP08236 651 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 HOXB5P09067 269 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 SPARCP09486 303 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 LINC00271P0C7V0 271 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 HOXA5P20719 270 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 S100A10P60903 97 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 ZNF239Q16600 458 aaKnown RBP16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 ANKRD55Q3KP44 614 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 NSUN5P2Q63ZY6 315 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 TAF8Q7Z7C8 310 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 TERB2Q8NHR7 220 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 SLAMF9Q96A28 289 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 MARS2Q96GW9 593 aaKnown RBP16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 C14orf144Q96I85 54 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 VSTM2LQ96N03 204 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 AMDHD2Q9Y303 409 aa16.63■□□□□ 0.25
ECHDC1-214ENST00000474289 C2orf74A8MZ97 194 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 LMX1BO60663 402 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 FGF19O95750 216 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 EML2O95834 649 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 HKR1P10072 659 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 PI3P19957 117 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 NPY4RP50391 375 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 SUPT4H1P63272 117 aaKnown RBP16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 SLC18B1Q6NT16 456 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 C1QL4Q86Z23 238 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 OR4K15Q8NH41 348 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 SCRT1Q9BWW7 348 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 ADAM19Q9H013 955 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 SLC26A1Q9H2B4 701 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 CNTD2Q9H8S5 307 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 LMAN1LQ9HAT1 526 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 DEC1Q9P2X7 70 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 FREM3P0C091 2139 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 COL4A2P08572 1712 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 CST4P01036 141 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 IFNA17P01571 189 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 PET100P0DJ07 73 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 ACRP10323 421 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 TBPP20226 339 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 SNCAP37840 140 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 ROM1Q03395 351 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 GAB4Q2WGN9 574 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 OR2A2Q6IF42 318 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 AKR7LQ8NHP1 331 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 FLVCR1-AS1Q8TAF5 88 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 KTI12Q96EK9 354 aaPredicted RBP16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 ZDHHC12Q96GR4 267 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 METTL8Q9H825 291 aaKnown RBP16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 SERGEFQ9UGK8 458 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 GPR132Q9UNW8 380 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 LRP12Q9Y561 859 aa16.62■□□□□ 0.25
ECHDC1-214ENST00000474289 TBC1D3DA0A087WVF3 549 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 TBC1D3LB9A6J9 549 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 TSPAN15O95858 294 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 IFI6P09912 130 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 TBC1D3HP0C7X1 549 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 PNMTP11086 282 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 CCR4P51679 360 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 RIDAP52758 137 aaKnown RBP16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 MIDNQ504T8 468 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 TBC1D3CQ6IPX1 549 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 FOXRED2Q8IWF2 684 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 TBC1D3Q8IZP1 549 aaPredicted RBP16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 ZNF565Q8N9K5 539 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 POC1AQ8NBT0 407 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 OR10H5Q8NGA6 315 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 OR56B1Q8NGI3 324 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 OR2I1PQ8NGU4 316 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 CHST5Q9GZS9 411 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 MRPL22Q9NWU5 206 aaKnown RBP16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 GSKIPQ9P0R6 139 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 HHLA2Q9UM44 414 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 LOC107986453A0A1B0GWG9 222 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 IL15RAQ13261 267 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 ZNF124Q15973 351 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 GUK1Q16774 197 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 AGBL4Q5VU57 503 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 WBP2NLQ6ICG8 309 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 CA13Q8N1Q1 262 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 DTWD2Q8NBA8 298 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 OR1J1Q8NGS3 322 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 C8orf44Q96CB5 159 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 DNAJA3Q96EY1 480 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 SRMSQ9H3Y6 488 aa16.61■□□□□ 0.25
ECHDC1-214ENST00000474289 UMAD1C9J7I0 102 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 SLC35E2P0CK97 266 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 CSF2RAP15509 400 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 WASP42768 502 aa16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 CDX1P47902 265 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-214ENST00000474289 SRSF5Q13243 272 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms