RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 CMC2Q9NRP2 79 aa16.46■□□□□ 0.23
COMMD1-208ENST00000472729 MRPL22Q9NWU5 206 aaKnown RBP16.46■□□□□ 0.23
COMMD1-208ENST00000472729 FAM53CQ9NYF3 392 aa16.46■□□□□ 0.23
COMMD1-208ENST00000472729 KIF17Q9P2E2 1029 aa16.46■□□□□ 0.23
COMMD1-208ENST00000472729 METRNQ9UJH8 293 aa16.46■□□□□ 0.23
COMMD1-208ENST00000472729 N6AMT1Q9Y5N5 214 aa16.46■□□□□ 0.23
COMMD1-208ENST00000472729 HMGN1P05114 100 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 IRF2P14316 349 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 GRK5P34947 590 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 CBX1P83916 185 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 DRAM2Q6UX65 266 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 Q6ZR03 302 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 ZNF283Q8N7M2 679 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 OR10AD1Q8NGE0 317 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 MAP6Q96JE9 813 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 OCEL1Q9H607 264 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 SP140LQ9H930 580 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 DNAJB9Q9UBS3 223 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 COMMD3-BMI1R4GMX3 469 aa16.45■□□□□ 0.22
COMMD1-208ENST00000472729 CHD3Q12873 2000 aaKnown RBP16.45■□□□□ 0.22
COMMD1-208ENST00000472729 IQCF6A8MYZ5 107 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 PLPP2O43688 288 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 PNPP00491 289 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 IGHV2-5P01817 119 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 ANXA8P13928 327 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 HSD11B1P28845 292 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 RPS27P42677 84 aaKnown RBP16.44■□□□□ 0.22
COMMD1-208ENST00000472729 ERFP50548 548 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 BTG1P62324 171 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 GK2Q14410 553 aaPredicted RBP16.44■□□□□ 0.22
COMMD1-208ENST00000472729 ZNF362Q5T0B9 420 aaPredicted RBP16.44■□□□□ 0.22
COMMD1-208ENST00000472729 DCAF12L2Q5VW00 463 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 COLCA1Q6ZS62 124 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 ZNF511Q8NB15 262 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 SPATA3Q8NHX4 192 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 DDOQ99489 341 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 SLC22A4Q9H015 551 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 OR51V1Q9H2C8 321 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 POMPQ9Y244 141 aa16.44■□□□□ 0.22
COMMD1-208ENST00000472729 GGT3PA6NGU5 568 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 ZNF878C9JN71 531 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 PRR23D1E9PI22 279 aaPredicted RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 FKBP6O75344 327 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 ATP5HO75947 161 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 APOC1P02654 83 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 PRR23D2P0DMB1 279 aaPredicted RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 GSTT1P30711 240 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 GRB2P62993 217 aaKnown RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 EIF2B1Q14232 305 aaKnown RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 GINS1Q14691 196 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 RSPO1Q2MKA7 263 aaPredicted RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 ERI1Q8IV48 349 aaKnown RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 C1orf87Q8N0U7 546 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 MUC20Q8N307 709 aaPredicted RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 RFLNBQ8N5W9 214 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 IQCF1Q8N6M8 205 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 SLAMF6Q96DU3 332 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 INTS14Q96SY0 518 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 SLC30A2Q9BRI3 323 aa16.43■□□□□ 0.22
COMMD1-208ENST00000472729 METTL17Q9H7H0 456 aaPredicted RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 PNRC2Q9NPJ4 139 aaKnown RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 DDX28Q9NUL7 540 aaKnown RBP16.43■□□□□ 0.22
COMMD1-208ENST00000472729 FAM183AA6NL82 134 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 TCF21O43680 179 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 DEAF1O75398 565 aaPredicted RBP16.42■□□□□ 0.22
COMMD1-208ENST00000472729 FOXH1O75593 365 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 CLUP10909 449 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 OSMP13725 252 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 GATA3P23771 443 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 PRKXP51817 358 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 RPS7P62081 194 aaKnown RBP16.42■□□□□ 0.22
COMMD1-208ENST00000472729 KRTAP27-1Q3LI81 207 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 TEX30Q5JUR7 227 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 LYPD4Q6UWN0 246 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 SPATC1Q76KD6 591 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 SHFQ7M4L6 423 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 NAA40Q86UY6 237 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.42■□□□□ 0.22
COMMD1-208ENST00000472729 OR11L1Q8NGX0 322 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 OR6N2Q8NGY6 317 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 SLC7A6OSQ96CW6 309 aaPredicted RBP16.42■□□□□ 0.22
COMMD1-208ENST00000472729 MEGF10Q96KG7 1140 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 KCNJ15Q99712 375 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 NMNAT2Q9BZQ4 307 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 GCM1Q9NP62 436 aa16.42■□□□□ 0.22
COMMD1-208ENST00000472729 F5H5P2 479 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 J3QLI3 93 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 GSC2O15499 205 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 TBX1O43435 398 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 ANXA2P07355 339 aaKnown RBP16.41■□□□□ 0.22
COMMD1-208ENST00000472729 MDH2P40926 338 aaKnown RBP16.41■□□□□ 0.22
COMMD1-208ENST00000472729 LCN2P80188 198 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 MZT1Q08AG7 82 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 OR8G1Q15617 311 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 TMEM155Q4W5P6 130 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 KLHL12Q53G59 568 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 SPRNQ5BIV9 151 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 ZNRF4Q8WWF5 429 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 DNAJC9Q8WXX5 260 aa16.41■□□□□ 0.22
COMMD1-208ENST00000472729 TOR3AQ9H497 397 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms