RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 A0A1B0GW55 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 hCG_1807616A0A1W2PRN6 198 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 TMEM120BA0PK00 339 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 MEIOCA2RUB1 952 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 OR6C6A6NF89 314 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 H3BUX3 64 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 LGALS8O00214 317 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 IMPA2O14732 288 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 NPFFO15130 113 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 XPNPEP2O43895 674 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 GRPP07492 148 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 TSPAN19P0C672 248 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4L2P0CJ85 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4L3P0CJ86 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4L4P0CJ87 422 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4L5P0CJ88 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4L6P0CJ89 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4L7P0CJ90 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 CA6P23280 308 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 PAX6P26367 422 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 SLC9A3P48764 834 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 RGS6P49758 472 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 KCNJ8Q15842 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 MEP1BQ16820 701 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 CORO6Q6QEF8 472 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4L9Q6RFH8 374 aaPredicted RBP7.49□□□□□ -1.21
CCDC171-204ENST00000470191 EPGNQ6UW88 154 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DLEU7Q6UYE1 221 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 ZNF826PQ6ZT77 177 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DHDDSQ86SQ9 333 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 GALNT4Q8N4A0 578 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 PCYOX1LQ8NBM8 494 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 OR13C2Q8NGS9 318 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 PPP1R35Q8TAP8 253 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 APOBEC3DQ96AK3 386 aaPredicted RBP7.49□□□□□ -1.21
CCDC171-204ENST00000470191 SLCO4A1Q96BD0 722 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 R3HDM4Q96D70 268 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 Q96M85 177 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 NKX3-1Q99801 234 aaPredicted RBP7.49□□□□□ -1.21
CCDC171-204ENST00000470191 EBF4Q9BQW3 602 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 CNTD2Q9H8S5 307 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 FN3KRPQ9HA64 309 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 C1orf123Q9NWV4 160 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 GRHPRQ9UBQ7 328 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 DUX4Q9UBX2 424 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 FBLN5Q9UBX5 448 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 RPS6KA6Q9UK32 745 aa7.49□□□□□ -1.21
CCDC171-204ENST00000470191 COA3Q9Y2R0 106 aaPredicted RBP7.49□□□□□ -1.21
CCDC171-204ENST00000470191 TRAV38-1A0A0B4J264 116 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 LOC100653049A0A140TA62 436 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 OOEPA6NGQ2 149 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 A6NLC8 198 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 RNASEK-C17orf49H0YIS7 233 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 XKRYO14609 159 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 SLC16A7O60669 478 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 KRT34O76011 436 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 OR5F1O95221 314 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 FSTL3O95633 263 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 CTLA4P16410 223 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 EEF1B2P24534 225 aaKnown RBP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 SAA4P35542 130 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 CD200P41217 278 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 GATA4P43694 442 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 YAP1P46937 504 aaKnown RBP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 EFNB2P52799 333 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 RAD23AP54725 363 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 CDONQ4KMG0 1287 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 MESTQ5EB52 335 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 OAFQ86UD1 273 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 NAA40Q86UY6 237 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 FAM90A1Q86YD7 464 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 LNX2Q8N448 690 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 LRRC75AQ8NAA5 344 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 OR4S1Q8NGB4 309 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 OR4C13Q8NGP0 309 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 OR10A6Q8NH74 314 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 Q8TCH9 128 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 SPRYD4Q8WW59 207 aaPredicted RBP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 LIPHQ8WWY8 451 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 H1FXQ92522 213 aaKnown RBP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 RORBQ92753 470 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 CLPTM1LQ96KA5 538 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 ZNF570Q96NI8 536 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 CCL13Q99616 98 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 ADAT1Q9BUB4 502 aaKnown RBP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 RHCGQ9UBD6 479 aa7.48□□□□□ -1.21
CCDC171-204ENST00000470191 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 RPUSD1Q9UJJ7 312 aaKnown RBP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 V9GYY5 206 aaPredicted RBP7.48□□□□□ -1.21
CCDC171-204ENST00000470191 TEX13CA0A0J9YWL9 993 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 A0A1B0GVI7 797 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 A0A1W2PRX2 142 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 EFCAB9A8MZ26 197 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 F5H5K5 113 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 K7EIL1 84 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 LCATP04180 440 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 CD28P10747 220 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 IGLL1P15814 213 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 GPR4P46093 362 aa7.47□□□□□ -1.21
CCDC171-204ENST00000470191 IDH3AP50213 366 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms