RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IGHV3-20A0A0C4DH32 117 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 EFNA2O43921 213 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 SSX5O60225 188 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 GLB1P16278 677 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 NKPD1Q17RQ9 610 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 ANKRD37Q7Z713 158 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 CD163Q86VB7 1156 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 GVQW1Q8N7I0 195 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 RELL2Q8NC24 303 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-209ENST00000470026 STT3BQ8TCJ2 826 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 PPP1R1CQ8WVI7 109 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 ZNF768Q9H5H4 540 aaKnown RBP12.13□□□□□ -0.47
BRCA1-209ENST00000470026 PTGES2Q9H7Z7 377 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 RPH3AQ9Y2J0 694 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-209ENST00000470026 HRH3Q9Y5N1 445 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 KANTRA0A1W2PQU2 76 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 DBX1A6NMT0 343 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 EFSO43281 561 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 SYT7O43581 403 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 STK17BO94768 372 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 SRFP11831 508 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 NAT1P18440 290 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 LAP3P28838 519 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 CSNK1EP49674 416 aaKnown RBP12.13□□□□□ -0.47
BRCA1-209ENST00000470026 RHBDD2Q6NTF9 364 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 WDR74Q6RFH5 385 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-209ENST00000470026 KLHL24Q6TFL4 600 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 OR2W3Q7Z3T1 314 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 TMPRSS9Q7Z410 1059 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 OR5D14Q8NGL3 314 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 NUDCD2Q8WVJ2 157 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 VRK1Q99986 396 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-209ENST00000470026 FOXQ1Q9C009 403 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 MS4A7Q9GZW8 240 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-209ENST00000470026 MOB1AQ9H8S9 216 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 COMMD9Q9P000 198 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 SRPK3Q9UPE1 567 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 B3GALT1Q9Y5Z6 326 aa12.13□□□□□ -0.47
BRCA1-209ENST00000470026 PHF3Q92576 2039 aaKnown RBP12.12□□□□□ -0.47
BRCA1-209ENST00000470026 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 VSTM2BA6NLU5 285 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 OR2AT4A6NND4 320 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 CEACAM18A8MTB9 384 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 SULT2B1O00204 365 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 EIF1AYO14602 144 aaKnown RBP12.12□□□□□ -0.47
BRCA1-209ENST00000470026 GIMD1P0DJR0 217 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 CTRB1P17538 263 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 RAB3AP20336 220 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 CASRP41180 1078 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 EIF1AXP47813 144 aaKnown RBP12.12□□□□□ -0.47
BRCA1-209ENST00000470026 P2RY4P51582 365 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 ATP1B3P54709 279 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 BIDP55957 195 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 THEM4Q5T1C6 240 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 OR52W1Q6IF63 320 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 OR10H5Q8NGA6 315 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 OR52H1Q8NGJ2 320 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 OR10K1Q8NGX5 313 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 OR10R2Q8NGX6 335 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 MRGPRX4Q96LA9 322 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 C1orf147Q96MC9 270 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-209ENST00000470026 PHB2Q99623 299 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 LHFPL6Q9Y693 200 aa12.12□□□□□ -0.47
BRCA1-209ENST00000470026 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 CCSO14618 274 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 DUS4LO95620 317 aaKnown RBP12.11□□□□□ -0.47
BRCA1-209ENST00000470026 CHRM2P08172 466 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 MSX1P28360 303 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 HRH1P35367 487 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 FOXL2P58012 376 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 FOXK1P85037 733 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 SLC22A6Q4U2R8 563 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 POC1BQ8TC44 478 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 NKD1Q969G9 470 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 C5orf34Q96MH7 638 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 PDCD10Q9BUL8 212 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 LPAR5Q9H1C0 372 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 TMEM185BQ9H7F4 350 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 TEX46H3BTG2 121 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 TSPAN4O14817 238 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 WDPCPO95876 746 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 CSN2P05814 226 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-209ENST00000470026 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 CCL1P22362 96 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 GNALP38405 381 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 PTGDSP41222 190 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 LUMP51884 338 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-209ENST00000470026 IL13RA1P78552 427 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 TAF13Q15543 124 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 ZNF239Q16600 458 aaKnown RBP12.11□□□□□ -0.47
BRCA1-209ENST00000470026 PLPPR5Q32ZL2 321 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 CFAP77Q6ZQR2 320 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 SHISA6Q6ZSJ9 500 aa12.11□□□□□ -0.47
BRCA1-209ENST00000470026 RABEPKQ7Z6M1 372 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms