RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 RERGLQ9H628 205 aa10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 CNTD2Q9H8S5 307 aa10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 FN3KRPQ9HA64 309 aa10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 ZNRD1Q9P1U0 126 aa10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 FBLN5Q9UBX5 448 aa10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 A4GNTQ9UNA3 340 aa10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 COA3Q9Y2R0 106 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC12-216ENST00000469400 TRAV38-1A0A0B4J264 116 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 DVL1O14640 695 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 NDUFA2O43678 99 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 KHDRBS3O75525 346 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 ECDO95905 644 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 GYPAP02724 150 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 CD14P08571 375 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 FBP1P09467 338 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 ZNF26P17031 533 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 GABRA5P31644 462 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 PRKCDQ05655 676 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 GK2Q14410 553 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 OXLD1Q5BKU9 147 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 FAM122BQ7Z309 247 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 C11orf44Q8N8P7 122 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 FAM156AQ8NDB6 213 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 ZNF583Q96ND8 569 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 COQ7Q99807 217 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 HDHD2Q9H0R4 259 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 SYT4Q9H2B2 425 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 PPA2Q9H2U2 334 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 SIGLEC9Q9Y336 463 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 CAB39Q9Y376 341 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 KPTNQ9Y664 436 aa10.54□□□□□ -0.72
TRAPPC12-216ENST00000469400 A0A1B0GVI7 797 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 ANKRD61A6NGH8 418 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 OOEPA6NGQ2 149 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 IMPA2O14732 288 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 IFNA14P01570 189 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 SLC9A3P48764 834 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 HIST1H3AP68431 136 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 PRB3Q04118 309 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 DBPQ10586 325 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 OR8G1Q15617 311 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 KCNMB1Q16558 191 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 C11orf91Q3C1V1 193 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 KRTAP27-1Q3LI81 207 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 VAX1Q5SQQ9 334 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 HIST2H3PS2Q5TEC6 136 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 NANOGP8Q6NSW7 305 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 CORO6Q6QEF8 472 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 HIST2H3AQ71DI3 136 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 CALHM3Q86XJ0 350 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 GJC3Q8NFK1 279 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 NPRL2Q8WTW4 380 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 SPRYD4Q8WW59 207 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 CFHR4Q92496 578 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 ZNF570Q96NI8 536 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 NMNAT1Q9HAN9 279 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 TRIM36Q9NQ86 728 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 RHCGQ9UBD6 479 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 FOXJ3Q9UPW0 622 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 POLR1DQ9Y2S0 133 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 LHFPL6Q9Y693 200 aa10.53□□□□□ -0.72
TRAPPC12-216ENST00000469400 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 CDC42EP2O14613 210 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 PTBP3O95758 552 aaKnown RBP10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 ACSM4P0C7M7 580 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 CA6P23280 308 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 IFNA8P32881 189 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 GPR4P46093 362 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 YAP1P46937 504 aaKnown RBP10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 POU4F2Q12837 409 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 KRR1Q13601 381 aaKnown RBP10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 MEP1BQ16820 701 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 ZBED5Q49AG3 693 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 CYBRD1Q53TN4 286 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 RABL3Q5HYI8 236 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 METAP1DQ6UB28 335 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 C1orf122Q6ZSJ8 110 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 FAM90A1Q86YD7 464 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 FGFRL1Q8N441 504 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 OR5R1Q8NH85 324 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 PPP1R35Q8TAP8 253 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 ST8SIA4Q92187 359 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 SGCDQ92629 289 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 SLCO4A1Q96BD0 722 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 NUAK2Q9H093 628 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 TOR3AQ9H497 397 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 NECAP2Q9NVZ3 263 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 AURKAIP1Q9NWT8 199 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 VSX1Q9NZR4 365 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 RPS6KA6Q9UK32 745 aa10.52□□□□□ -0.73
TRAPPC12-216ENST00000469400 A0A1W2PRD5 423 aa10.51□□□□□ -0.73
TRAPPC12-216ENST00000469400 A0A1W2PRF3 423 aa10.51□□□□□ -0.73
TRAPPC12-216ENST00000469400 A0A1W2PRM7 423 aa10.51□□□□□ -0.73
TRAPPC12-216ENST00000469400 F5H5K5 113 aa10.51□□□□□ -0.73
TRAPPC12-216ENST00000469400 NPFFO15130 113 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms