RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 RBBP9O75884 186 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 SNAPC5O75971 98 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 TGM6O95932 706 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CHRM2P08172 466 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CSF1P09603 554 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 RFPL3SP0C7P2 107 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 UBBP0CG47 229 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 POU3F2P20265 443 aaPredicted RBP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 RAB3AP20336 220 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PSMB1P20618 241 aaKnown RBP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 GDF1P27539 372 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CDAP32320 146 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 RRADP55042 308 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CLDN15P56746 228 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CLDN12P56749 244 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF121P58317 390 aaPredicted RBP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PCBD1P61457 104 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 OC90Q02509 493 aaPredicted RBP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 RIPPLY1Q0D2K3 151 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 SPEM2Q0P670 501 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 SCRN3Q0VDG4 424 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CBX3Q13185 183 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 TAF13Q15543 124 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 OR1C1Q15619 314 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 KCNJ8Q15842 424 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 TBRG1Q3YBR2 411 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 GLYATL3Q5SZD4 288 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 ATAD3CQ5T2N8 411 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 STPG1Q5TH74 334 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CD276Q5ZPR3 534 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 DRAM2Q6UX65 266 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 UTS2BQ765I0 119 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF627Q7L945 461 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 OR2W3Q7Z3T1 314 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 FGD2Q7Z6J4 655 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 YRDCQ86U90 279 aaKnown RBP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 ZFP62Q8NB50 900 aaPredicted RBP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 CLEC1AQ8NC01 280 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 MDS2Q8NDY4 140 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 OR1M1Q8NGA1 313 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 OR8B12Q8NGG6 310 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 OR52H1Q8NGJ2 320 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 OR10D3Q8NH80 312 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 GPX8Q8TED1 209 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 SSC4DQ8WTU2 575 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PP6455Q8WZ26 134 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 AKAP1Q92667 903 aaKnown RBP eCLIP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 HAS2Q92819 552 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 SPTSSAQ969W0 71 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PHF21AQ96BD5 680 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 FGGYQ96C11 551 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 ULBP2Q9BZM5 246 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 GP6Q9HCN6 339 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 HRASLSQ9HDD0 168 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PARPBPQ9NWS1 579 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 ING3Q9NXR8 418 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PTTG3PQ9NZH4 202 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 GTF2A1LQ9UNN4 478 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 N6AMT1Q9Y5N5 214 aa6.71□□□□□ -1.34
COL6A3-208ENST00000468792 MRPS18BQ9Y676 258 aaKnown RBP6.71□□□□□ -1.34
COL6A3-208ENST00000468792 PINLYPA6NC86 204 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 OR5H15A6NDH6 313 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 G3V3Y1 287 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 RGS13O14921 159 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 RER1O15258 196 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 NME2P1O60361 137 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 PEX14O75381 377 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 MTRF1O75570 445 aaKnown RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 TRAPPC6AO75865 159 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 WDPCPO95876 746 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ACTL6AO96019 429 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 F12P00748 615 aaPredicted RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 IL5P05113 134 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 LPLP06858 475 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 YES1P07947 543 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SP1P08047 785 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 PRF1P14222 555 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ZNF708P17019 499 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 KLK2P20151 261 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 NME2P22392 152 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 CRYGSP22914 178 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 TCEA1P23193 301 aaKnown RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 MPZP25189 248 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 GIFP27352 417 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ERP29P30040 261 aaKnown RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 PRSS3P35030 304 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 THBS4P35443 961 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 CX3CR1P49238 355 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SRP9P49458 86 aaKnown RBP6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SELENOPP49908 381 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 LHX2P50458 406 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 CLDN18P56856 261 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ACTBP60709 375 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ACTG1P63261 375 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 QRFPP83859 136 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 RAB35Q15286 201 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 SGCAQ16586 387 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 GSG1Q2KHT4 349 aa6.7□□□□□ -1.34
COL6A3-208ENST00000468792 ODF4Q2M2E3 257 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms