RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ZNF679Q8IYX0 411 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 Q8NA96 180 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 MED18Q9BUE0 208 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 RNF122Q9H9V4 155 aa7.27□□□□□ -1.25
BRCA1-208ENST00000468300 DSPP15924 2871 aaKnown RBP7.27□□□□□ -1.25
BRCA1-208ENST00000468300 OR4C45A6NMZ5 311 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 AQP7O14520 342 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 PIN1P1O15428 100 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 CLPXO76031 633 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 CSNK1A1P48729 337 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 PRRX1P54821 245 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TAS2R43P59537 309 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF324BQ6AW86 544 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 DPPA2Q7Z7J5 298 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 MEIOBQ8N635 442 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ASB17Q8WXJ9 295 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ELOVL3Q9HB03 270 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TIGARQ9NQ88 270 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 G6PC2Q9NQR9 355 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 CCDC59Q9P031 241 aaKnown RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 CLCF1Q9UBD9 225 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 PLEKHB1Q9UF11 243 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 SSR3Q9UNL2 185 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TMEM14AQ9Y6G1 99 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ITPR1Q14643 2758 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 MED12LQ86YW9 2145 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF724A8MTY0 619 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TFECO14948 347 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 RGS9O75916 674 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 NR2C1P13056 603 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 SDC2P34741 201 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 SERPINB10P48595 397 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 AKR1D1P51857 326 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 FOXG1P55316 489 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 SSX2Q16385 188 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TIMM50Q3ZCQ8 353 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 WDR38Q5JTN6 314 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ASPHD2Q6ICH7 369 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 LIX1LQ8IVB5 337 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 MCEMP1Q8IX19 187 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 YIPF7Q8N8F6 280 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 OR2G2Q8NGZ5 317 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 OR10AC1Q8NH08 325 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 EXTL1Q92935 676 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 FBXO17Q96EF6 278 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 C12orf57Q99622 126 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TMUB1Q9BVT8 246 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF416Q9BWM5 594 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TP53TG5Q9Y2B4 290 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 A0A0G2JK05 382 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TRBV2A0A0J9YWF9 115 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 SMIM30A4D0T7 59 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 HMX3A6NHT5 357 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 A8MV72 311 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 PHYHO14832 338 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 DHHO43323 396 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 RPP14O95059 124 aaKnown RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 DIRAS3O95661 229 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ALKBH1Q13686 389 aaKnown RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 PDSS1Q5T2R2 415 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 NUFIP2Q7Z417 695 aaKnown RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 OR51A4Q8NGJ6 313 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 SLC25A46Q96AG3 418 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 DCBLD2Q96PD2 775 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 GFI1Q99684 422 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 LDAHQ9H6V9 325 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 FAM206AQ9NX38 181 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF224Q9NZL3 707 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 GDF2Q9UK05 429 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-208ENST00000468300 FREM1Q5H8C1 2179 aa7.26□□□□□ -1.25
BRCA1-208ENST00000468300 TRBV5-5A0A0J9YX44 114 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 C1QTNF9BB2RNN3 333 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 E9PLN8 166 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 TSPAN4O14817 238 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 RER1O15258 196 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SPDEFO95238 335 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 HLA-DPB1P04440 258 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 C1QTNF9P0C862 333 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 TSPO2Q5TGU0 170 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 AAED1Q7RTV5 226 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 PRSS45Q7RTY3 260 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 CATSPERDQ86XM0 798 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 RDH10Q8IZV5 341 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 GALNT11Q8NCW6 608 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 FGFBP3Q8TAT2 258 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ST8SIA2Q92186 375 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 C4orf45Q96LM5 186 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ALKBH3Q96Q83 286 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-208ENST00000468300 TTYH2Q9BSA4 534 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 NELFAQ9H3P2 528 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 LIN7BQ9HAP6 207 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 GPR35Q9HC97 309 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 B3GNT3Q9Y2A9 372 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 A4D1N5 150 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 C5orf63A6NC05 138 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 HSPB2A8KAH6 182 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ALX3O95076 343 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 CAV3P56539 151 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 LSM6P62312 80 aaKnown RBP7.25□□□□□ -1.25
BRCA1-208ENST00000468300 HSPB2Q16082 182 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms