RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 PRRT1Q99946 306 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 CYB5R1Q9UHQ9 305 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 LOC101059948A0A1B0GTJ6 334 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 A0A1B0GW55 424 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DISC1C4P0D8 188 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 MS4A18H0YCH9 400 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 BCL2L11O43521 198 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 OR2T1O43869 369 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 AHSA1O95433 338 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 IL2RAP01589 272 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DUX4L2P0CJ85 424 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DUX4L3P0CJ86 424 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DUX4L4P0CJ87 422 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DUX4L5P0CJ88 424 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DUX4L6P0CJ89 424 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DUX4L7P0CJ90 424 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 IL11P20809 199 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 CD96P40200 585 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 CAPZA1P52907 286 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 EMP2P54851 167 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 MS4A18Q3C1V0 323 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 ZNF385CQ66K41 422 aaPredicted RBP13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 RAB12Q6IQ22 244 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 ZNF813Q6ZN06 617 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 LYG2Q86SG7 212 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 WDFY1Q8IWB7 410 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 KDM8Q8N371 416 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DTWD2Q8NBA8 298 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 ACBD4Q8NC06 268 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 TMEM185BQ9H7F4 350 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 DUX4Q9UBX2 424 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 RAB22AQ9UL26 194 aa13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 NOP16Q9Y3C1 178 aaKnown RBP13.12□□□□□ -0.31
PRPF38B-204ENST00000467302 COL6A3P12111 3177 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 TMEM269A0A1B0GVZ9 245 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 ATP6V1G2-DDX39BF2Z307 99 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 WDPCPO95876 746 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 LUMP51884 338 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 QRFPP83859 136 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 FMODQ06828 376 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 ZMYND11Q15326 602 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 NKPD1Q17RQ9 610 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 TMEM244Q5VVB8 128 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 C3orf33Q6P1S2 294 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 C5orf46Q6UWT4 87 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 CD163Q86VB7 1156 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 FJX1Q86VR8 437 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 TMEM105Q8N8V8 129 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 NFAM1Q8NET5 270 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 PPP1R1CQ8WVI7 109 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 ASB10Q8WXI3 467 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 RELTQ969Z4 430 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 PHYHIPLQ96FC7 376 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 VRK1Q99986 396 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 B3GNT4Q9C0J1 378 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 CST11Q9H112 138 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 CNTD2Q9H8S5 307 aa13.11□□□□□ -0.31
PRPF38B-204ENST00000467302 METTL21EPA6NDL7 271 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 A6NIZ1 184 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 VSTM2BA6NLU5 285 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 CCSO14618 274 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 NUPL2O15504 423 aaKnown RBP13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 CSN2P05814 226 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 FGF5P12034 268 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 ZNF823P16415 610 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 MMP16P51512 607 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 RAP1BP61224 184 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 RAP1AP62834 184 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 CXADRP78310 365 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 ZP4Q12836 540 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 UNC119Q13432 240 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 PPP1R1AQ13522 171 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 TRA2AQ13595 282 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 TAF13Q15543 124 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 CDNFQ49AH0 187 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 RNASE10Q5GAN6 216 aaKnown RBP13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 ACOT7LQ6ZUV0 252 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 LINC00346Q8IVM7 164 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 ZDHHC22Q8N966 263 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 APCDD1LQ8NCL9 501 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 OR6S1Q8NH40 331 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 MITD1Q8WV92 249 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 ZNF75AQ96N20 296 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 KCNK17Q96T54 332 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 OCIAD1Q9NX40 245 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 IGKV1D-43A0A0B4J1Z2 117 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 P2RY10O00398 339 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 NTN3O00634 580 aaPredicted RBP13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 SMAD9O15198 467 aaKnown RBP13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 APOC3P02656 99 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 CYC1P08574 325 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 CNR1P21554 472 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 ATP1B3P54709 279 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 IL11RAQ14626 422 aa13.1□□□□□ -0.31
PRPF38B-204ENST00000467302 FAHD2BQ6P2I3 314 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms