RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 NAT6Q93015 286 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 PTX4Q96A99 478 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 NARS2Q96I59 477 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 CFAP53Q96M91 514 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 HSD17B10Q99714 261 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 IL22Q9GZX6 179 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 RGCCQ9H4X1 137 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 EDA2RQ9HAV5 297 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 PATZ1Q9HBE1 687 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 ADGRA3Q8IWK6 1321 aa2.67□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGHV1OR15-9A0A0B4J2B8 117 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 TMEM223A0PJW6 202 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 HSBP1O75506 76 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 VAMP5O95183 116 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 FARS2O95363 451 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 GLAP06280 429 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 DCNP07585 359 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 GFAPP14136 432 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF32P17041 273 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 PRKACAP17612 351 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 HTR1DP28221 377 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 CASQ1P31415 396 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 PFN2P35080 140 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 FABP6P51161 128 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 YWHAEP62258 255 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 SYCNQ0VAF6 134 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 STK11Q15831 433 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 HADHQ16836 314 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 HIKESHIQ53FT3 197 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 LINC00483Q53H64 154 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 Q5W150 140 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 ADNP2Q6IQ32 1131 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 Q6ZR03 302 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 FAM122BQ7Z309 247 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 SNX20Q7Z614 316 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 WDR86Q86TI4 376 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 UNC93AQ86WB7 457 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 CDKL3Q8IVW4 592 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 LRRC75AQ8NAA5 344 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 OR51F2Q8NH61 342 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 RAB1CQ92928 201 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 HAUS1Q96CS2 278 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF317Q96PQ6 595 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 TDRD3Q9H7E2 651 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 ZNF430Q9H8G1 570 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 TMEM27Q9HBJ8 222 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 MYOZ1Q9NP98 299 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 MCUBQ9NWR8 336 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 YTHDF2Q9Y5A9 579 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGSF9BQ9UPX0 1349 aa2.66□□□□□ -1.98
CDC42BPA-211ENST00000466538 IGKV2-28A0A075B6P5 120 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 TRAV6A0A075B6T7 132 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 TRAV19A0A0A6YYK7 116 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF705GA8MUZ8 300 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 SERPINE3A8MV23 424 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 H7C1H1 209 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 RAD51BO15315 384 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 REM1O75628 298 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 WISP3O95389 354 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 IGKV2D-28P01615 120 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 HLA-DQA1P01909 254 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 APCSP02743 223 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 MRPL3P09001 348 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 AP1S2P56377 157 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 TAS2R39P59534 338 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 KDSRQ06136 332 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 TMED1Q13445 227 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF266Q14584 549 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 WDR43Q15061 677 aaKnown RBP eCLIP2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 C5orf47Q569G3 176 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 GCSAMLQ5JQS6 135 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 TMEM205Q6UW68 189 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 MRPL21Q7Z2W9 205 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 RIMKLAQ8IXN7 391 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR8U1Q8NH10 309 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 CA5BP1Q8WTZ4 195 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 FLYWCH2Q96CP2 140 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 RCN3Q96D15 328 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 FANCEQ9HB96 536 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 CYTL1Q9NRR1 136 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC17A7Q9P2U7 560 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 DDX19BQ9UMR2 479 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 RHBDD3Q9Y3P4 386 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 NEURL4Q96JN8 1562 aa2.65□□□□□ -1.99
CDC42BPA-211ENST00000466538 AHDC1Q5TGY3 1603 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF99A8MXY4 864 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 RSPH10B2B2RC85 870 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 ANKRD65E5RJM6 399 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 PLPP1O14494 284 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 TAAR5O14804 337 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 SOCS1O15524 211 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 CHMP2AO43633 222 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 SLC22A5O76082 557 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 OR56A5P0C7T3 313 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 ZNF688P0C7X2 276 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 RSPH10BP0C881 870 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 PGA4P0DJD7 388 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 PGA3P0DJD8 388 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 PGA5P0DJD9 388 aa2.64□□□□□ -1.99
CDC42BPA-211ENST00000466538 SRMP19623 302 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms