RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CRMP1Q14194 572 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 GK2Q14410 553 aaPredicted RBP21.77■■□□□ 1.08
U2AF1-206ENST00000464750 MICAQ29983 383 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 NAA40Q86UY6 237 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 LRRC28Q86X40 367 aaPredicted RBP21.77■■□□□ 1.08
U2AF1-206ENST00000464750 SEMA6DQ8NFY4 1073 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 OR10S1Q8NGN2 331 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 ZNF420Q8TAQ5 688 aaPredicted RBP21.77■■□□□ 1.08
U2AF1-206ENST00000464750 POP5Q969H6 163 aaKnown RBP21.77■■□□□ 1.08
U2AF1-206ENST00000464750 LRGUKQ96M69 825 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 DGCR6LQ9BY27 220 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 PATZ1Q9HBE1 687 aaKnown RBP21.77■■□□□ 1.08
U2AF1-206ENST00000464750 ARMC1Q9NVT9 282 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 COMMD3-BMI1R4GMX3 469 aa21.77■■□□□ 1.08
U2AF1-206ENST00000464750 A0A0A6YYJ9 748 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 F5H5P2 479 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 IFNL4K9M1U5 179 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 M0R135 149 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 RGS9O75916 674 aaPredicted RBP21.76■■□□□ 1.07
U2AF1-206ENST00000464750 PSKH1P11801 424 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 MALLQ13021 153 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 OR2T33Q8NG76 320 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 ZNF418Q8TF45 676 aaPredicted RBP21.76■■□□□ 1.07
U2AF1-206ENST00000464750 SPTSSAQ969W0 71 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 ZNF799Q96GE5 643 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 CLPTM1LQ96KA5 538 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 C7orf69Q9H7B7 122 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 DDX28Q9NUL7 540 aaKnown RBP21.76■■□□□ 1.07
U2AF1-206ENST00000464750 TMEM100Q9NV29 134 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 BAIAP2Q9UQB8 552 aa21.76■■□□□ 1.07
U2AF1-206ENST00000464750 IGHV3-64DA0A0J9YX35 117 aa21.75■■□□□ 1.07
U2AF1-206ENST00000464750 MDH2P40926 338 aaKnown RBP21.75■■□□□ 1.07
U2AF1-206ENST00000464750 SEC61A1P61619 476 aaKnown RBP21.75■■□□□ 1.07
U2AF1-206ENST00000464750 MUC20Q8N307 709 aaPredicted RBP21.75■■□□□ 1.07
U2AF1-206ENST00000464750 OR10G2Q8NGC3 310 aa21.75■■□□□ 1.07
U2AF1-206ENST00000464750 RBM4Q9BWF3 364 aaKnown RBP21.75■■□□□ 1.07
U2AF1-206ENST00000464750 TAS2R1Q9NYW7 299 aa21.75■■□□□ 1.07
U2AF1-206ENST00000464750 F5H0A9 414 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-206ENST00000464750 CYB5R3P00387 301 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-206ENST00000464750 HLA-DPB1P04440 258 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 GYPBP06028 91 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 SPARCP09486 303 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 RAP2AP10114 183 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 SLC6A9P48067 706 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 PGAP1Q75T13 922 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 MRPL21Q7Z2W9 205 aaKnown RBP21.74■■□□□ 1.07
U2AF1-206ENST00000464750 DCXRQ7Z4W1 244 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 MOGAT3Q86VF5 341 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-206ENST00000464750 SLCO4A1Q96BD0 722 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 OPN4Q9UHM6 478 aa21.74■■□□□ 1.07
U2AF1-206ENST00000464750 PPIAL4EA0A075B759 164 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 PPIAL4CA0A0B4J2A2 164 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 A0A1B0GWJ7 208 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 PPIAL4DF5H284 164 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 PPIAL4FP0DN26 164 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 SPI1P17947 270 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 FMO3P31513 532 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 ENTPD1P49961 510 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 SLC25A1P53007 311 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 NANPQ8TBE9 248 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 NIPSNAP1Q9BPW8 284 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 COPS4Q9BT78 406 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 NMNAT2Q9BZQ4 307 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 C1orf21Q9H246 121 aa21.73■■□□□ 1.07
U2AF1-206ENST00000464750 CEACAM18A8MTB9 384 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 A8MXK9 166 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 IFNGP01579 166 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 CLUP10909 449 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 OTX1P32242 354 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-206ENST00000464750 SNAI3Q3KNW1 292 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 ADGRG5Q8IZF4 528 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 ZNF511Q8NB15 262 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 OR6K6Q8NGW6 343 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 TEX47Q8TBZ9 253 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 SPRYD4Q8WW59 207 aaPredicted RBP21.72■■□□□ 1.07
U2AF1-206ENST00000464750 THTPAQ9BU02 230 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 MMP26Q9NRE1 261 aa21.72■■□□□ 1.07
U2AF1-206ENST00000464750 RIIAD1A6NNX1 92 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 DYNC1I1O14576 645 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 ACOT8O14734 319 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 ZNF205O95201 554 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 CST1P01037 141 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 FSHBP01225 129 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 ZNF3P17036 446 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 ANOS1P23352 680 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 GK3PQ14409 553 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 ESCO2Q56NI9 601 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 DEFB108BQ8NET1 73 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 SLAMF6Q96DU3 332 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 CHID1Q9BWS9 393 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 POLR3KQ9Y2Y1 108 aaPredicted RBP21.71■■□□□ 1.07
U2AF1-206ENST00000464750 DOCK11Q5JSL3 2073 aa21.71■■□□□ 1.07
U2AF1-206ENST00000464750 LRRC30A6NM36 301 aa21.7■■□□□ 1.06
U2AF1-206ENST00000464750 HILS1P60008 231 aa21.7■■□□□ 1.06
U2AF1-206ENST00000464750 PCK2Q16822 640 aa21.7■■□□□ 1.06
U2AF1-206ENST00000464750 ZNF181Q2M3W8 571 aa21.7■■□□□ 1.06
U2AF1-206ENST00000464750 DRAM2Q6UX65 266 aa21.7■■□□□ 1.06
U2AF1-206ENST00000464750 CD300LDQ6UXZ3 194 aa21.7■■□□□ 1.06
U2AF1-206ENST00000464750 C1orf87Q8N0U7 546 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 398.8 ms