RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 GEMIN6Q8WXD5 167 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM234Q8WY98 164 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MCHR2Q969V1 340 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 REEP6Q96HR9 211 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM56Q96MV1 263 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF48Q96MX3 618 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CCDC3Q9BQI4 270 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SGPP1Q9BX95 441 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SMIM3Q9BZL3 60 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF552Q9H707 407 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TAF9BQ9HBM6 251 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ZCCHC3Q9NUD5 404 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 HAO2Q9NYQ3 351 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TAS2R13Q9NYV9 303 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 USP36Q9P275 1121 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SIX4Q9UIU6 781 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NAGKQ9UJ70 344 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FBXW2Q9UKT8 454 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM56-RWDD3S4R434 201 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 EVPLQ92817 2033 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ANK1P16157 1881 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PRAMEF27A3QJZ7 478 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 MSGN1A6NI15 193 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PRAMEF26H0Y7S4 382 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 J3QLW9 94 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 RAB29O14966 203 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PRAMEF4O60810 478 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PRH1P02810 166 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PSG1P11464 419 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 SLC25A4P12235 298 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF19P17023 458 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 GPX2P18283 190 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 SLC2A5P22732 501 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 CDK2P24941 298 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PCSK1P29120 753 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 HOXA11P31270 313 aaPredicted RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 NTF4P34130 210 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 CEACAM3P40198 252 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 RAB28P51157 221 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 GEMP55040 296 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 WNT3AP56704 352 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM33P57088 247 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 SELENOVP59797 346 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 RPS15P62841 145 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 P2RY6Q15077 328 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 UPP1Q16831 310 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 NKPD1Q17RQ9 610 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 CLEC12BQ2HXU8 276 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 TDRG1Q3Y452 100 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 VWA2Q5GFL6 755 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PRAMEF9Q5VWM5 478 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 SAMD13Q5VXD3 122 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 RPL7L1Q6DKI1 246 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 MRM1Q6IN84 353 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 TCTN3Q6NUS6 607 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PRSS57Q6UWY2 283 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 UNQ9370/PRO34162Q6UXP9 181 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 DLK2Q6UY11 383 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 HMGN2P46Q86SG4 172 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PIP4P1Q86T03 277 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 VRK2Q86Y07 508 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 RBM45Q8IUH3 476 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF843Q8N446 348 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 RNF175Q8N4F7 328 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 LINC00471Q8N535 108 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 C17orf47Q8NEP4 570 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 OR13C9Q8NGT0 318 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 ABHD4Q8TB40 342 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 IL22RA2Q969J5 263 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 ERGIC1Q969X5 290 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 ZBTB8AQ96BR9 441 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 RAB39BQ96DA2 213 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 S100A16Q96FQ6 103 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 MIEN1Q9BRT3 115 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 FNDC11Q9BVV2 318 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 LGR4Q9BXB1 951 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 PLA2G12AQ9BZM1 189 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 FGF20Q9NP95 211 aaPredicted RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 MRPL17Q9NRX2 175 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 MARCH5Q9NX47 278 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 APOBEC3BQ9UH17 382 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 SRPK3Q9UPE1 567 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 ARL5AQ9Y689 179 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 DOCK3Q8IZD9 2030 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 KIR2DL5BA0A0G2JN68 375 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 KIR2DL5BA0A0G2JPC4 375 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 EDDM13A0A1B0GTR0 161 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 IRGMA1A4Y4 181 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 CPSF4LA6NMK7 179 aaKnown RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF891A8MT65 544 aaPredicted RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 H0YL77 283 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 M0QYG6 137 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 CLDN5O00501 218 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 SOCS6O14544 535 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 GAPDHSO14556 408 aaPredicted RBP3.23□□□□□ -1.89
COL8A1-205ENST00000463753 FFAR1O14842 300 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 CTDSPLO15194 276 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 SYT7O43581 403 aa3.23□□□□□ -1.89
COL8A1-205ENST00000463753 TLX3O43711 291 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms