RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 WDSUB1Q8N9V3 476 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 OR6M1Q8NGM8 313 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 EXO5Q9H790 373 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 P4HTMQ9NXG6 502 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 DHDHQ9UQ10 334 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 FXYD6-FXYD2A0A087WZ82 144 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 TRAV14DV4A0A0A6YYC5 116 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 LOC101059948A0A1B0GTJ6 334 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SHISA8B8ZZ34 492 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 C21orf140B9A014 251 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 TP53I11O14683 189 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 GPANK1O95872 356 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ISG15P05161 165 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CD2P06729 351 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF735P0CB33 412 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CCL3P10147 92 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 HTR2CP28335 458 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 MSX1P28360 303 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 AGTR1P30556 359 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CD96P40200 585 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CHAF1BQ13112 559 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ACKR1Q16570 336 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 C1orf100Q5SVJ3 147 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CLVS2Q5SYC1 327 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 PXDC1Q5TGL8 231 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 OR2M3Q8NG83 312 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 OR6S1Q8NH40 331 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 OR1S1Q8NH92 325 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 STK35Q8TDR2 534 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 RELTQ969Z4 430 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF587Q96SQ5 575 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 LRFN3Q9BTN0 628 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CHST6Q9GZX3 395 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SLC25A32Q9H2D1 315 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SH2D2AQ9NP31 389 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SDHAF3Q9NRP4 125 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CYB5R1Q9UHQ9 305 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SLC22A13Q9Y226 551 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 MRPS18BQ9Y676 258 aaKnown RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 TMEM82A0PJX8 343 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SLC22A23A1A5C7 686 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 FTCDNL1E5RQL4 147 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 RAD1O60671 282 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 RAB3DO95716 219 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 OR4E1P0C645 316 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 UBBP0CG47 229 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 UBCP0CG48 685 aaKnown RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 HLA-GP17693 338 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ACHEP22303 614 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 APOBEC1P41238 236 aaKnown RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 NBL1P41271 181 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF41P51814 821 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 RIDAP52758 137 aaKnown RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 RPS27AP62979 156 aaKnown RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 UBA52P62987 128 aaKnown RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF345Q14585 488 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 PCK2Q16822 640 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SLC25A53Q5H9E4 307 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF468Q5VIY5 522 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 C5orf46Q6UWT4 87 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ADGRE4PQ86SQ3 457 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 PDZD9Q8IXQ8 264 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 C12orf45Q8N5I9 185 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-204ENST00000461897 FADS6Q8N9I5 356 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 COQ8AQ8NI60 647 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 POC1BQ8TC44 478 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SLC25A36Q96CQ1 311 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 NTNG2Q96CW9 530 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 GPR87Q9BY21 358 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 MFFQ9GZY8 342 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 DNTTIP1Q9H147 329 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ATG5Q9H1Y0 275 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 POFUT1Q9H488 388 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 LDAHQ9H6V9 325 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 PROK2Q9HC23 129 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 SLC2A8Q9NY64 477 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 CKLFQ9UBR5 152 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 RHBDD3Q9Y3P4 386 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 ASPMQ8IZT6 3477 aa11.06□□□□□ -0.64
COL4A6-204ENST00000461897 MUC6Q6W4X9 2439 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 A0A0D9SG52 128 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 EFNA2O43921 213 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 ICAM2P13598 275 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 MGMTP16455 207 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 RAB6AP20340 208 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 IL11P20809 199 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 PTGS2P35354 604 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 MFGE8Q08431 387 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-204ENST00000461897 FGL1Q08830 312 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 ZMYND11Q15326 602 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 C4orf46Q504U0 113 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 H3F3CQ6NXT2 135 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 TMEM156Q8N614 296 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 OR5M8Q8NGP6 311 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 OR52N5Q8NH56 324 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 PAQR8Q8TEZ7 354 aa11.05□□□□□ -0.64
COL4A6-204ENST00000461897 ARL5BQ96KC2 179 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms