RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 DPM1O60762 260 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 LRP4O75096 1905 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 OR2J3O76001 311 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 SRP72O76094 671 aaKnown RBP2.04□□□□□ -2.08
RFC4-211ENST00000460408 KRT14P02533 472 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 RETP07949 1114 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 ANXA5P08758 320 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 RSPH10BP0C881 870 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 OTX1P32242 354 aaPredicted RBP2.04□□□□□ -2.08
RFC4-211ENST00000460408 MAS1LP35410 378 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 PLXNA3P51805 1871 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 TGM3Q08188 693 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 ECH1Q13011 328 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 EIF4EBP2Q13542 120 aaPredicted RBP2.04□□□□□ -2.08
RFC4-211ENST00000460408 CLINT1Q14677 625 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 Q6ZR03 302 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 FAM92BQ6ZTR7 304 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 HDDC2Q7Z4H3 204 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 OR10J6PQ8NGY7 276 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 SLC7A13Q8TCU3 470 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 ZNF578Q96N58 590 aaPredicted RBP2.04□□□□□ -2.08
RFC4-211ENST00000460408 VCXQ9H320 206 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 PIEZO2Q9H5I5 2752 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 NOX3Q9HBY0 568 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 GPATCH2LQ9NWQ4 482 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 MTCH2Q9Y6C9 303 aa2.04□□□□□ -2.08
RFC4-211ENST00000460408 BRWD1Q9NSI6 2320 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 LAMB1P07942 1786 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 CFAP46Q8IYW2 2715 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 MYO3BQ8WXR4 1341 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 IGHV5-51A0A0C4DH38 117 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 CTAGE15A4D2H0 777 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 LRRIQ3A6PVS8 624 aaPredicted RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 TCP11X1B4DZS4 312 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 INS-IGF2F8WCM5 200 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 DNALI1O14645 258 aaPredicted RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 WBP4O75554 376 aaKnown RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 FTH1P02794 183 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 SERPINA5P05154 406 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 IL9P15248 144 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 ZNF250P15622 560 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 ZNF24P17028 368 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 LONP1P36776 959 aaKnown RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 GPX4P36969 197 aaPredicted RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 RPS9P46781 194 aaKnown RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 CYB561P49447 251 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 MNAT1P51948 309 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 ADARB1P78563 741 aaKnown RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 SIGLEC14Q08ET2 396 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 ZNF726P1Q15940 193 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 FAM83EQ2M2I3 478 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 ALKBH6Q3KRA9 238 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 HSP90AB3PQ58FF7 597 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 HES5Q5TA89 166 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 CARD17Q5XLA6 110 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 NCCRP1Q6ZVX7 275 aaPredicted RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 ABHD13Q7L211 337 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 CTAGE6Q86UF2 777 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 IQCKQ8N0W5 287 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 TTC5Q8N0Z6 440 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 BBS5Q8N3I7 341 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 CYB561D1Q8N8Q1 229 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 NOXO1Q8NFA2 376 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 OR4C5Q8NGB2 326 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 OR10G2Q8NGC3 310 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 ZNF502Q8TBZ5 544 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 CREB3L1Q96BA8 519 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 BMFQ96LC9 184 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 TSNARE1Q96NA8 513 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 SERPINB12Q96P63 405 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 OR2A5Q96R48 311 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 TGS1Q96RS0 853 aaKnown RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 DEFB129Q9H1M3 183 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 PATZ1Q9HBE1 687 aaKnown RBP2.03□□□□□ -2.08
RFC4-211ENST00000460408 ST3GAL6Q9Y274 331 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 GOLT1BQ9Y3E0 138 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 ARID1AO14497 2285 aa2.03□□□□□ -2.08
RFC4-211ENST00000460408 FBN3Q75N90 2809 aa2.03□□□□□ -2.09
RFC4-211ENST00000460408 LTBP2Q14767 1821 aa2.03□□□□□ -2.09
RFC4-211ENST00000460408 RGPD2P0DJD1 1756 aa2.03□□□□□ -2.09
RFC4-211ENST00000460408 MAST2Q6P0Q8 1798 aa2.03□□□□□ -2.09
RFC4-211ENST00000460408 DDX60Q8IY21 1712 aaKnown RBP2.03□□□□□ -2.09
RFC4-211ENST00000460408 TECTAO75443 2155 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 EDC4Q6P2E9 1401 aaKnown RBP2.02□□□□□ -2.09
RFC4-211ENST00000460408 MAPK8IP3Q9UPT6 1336 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 IGHV3-74A0A0B4J1X5 117 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 J3QKU1 62 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 SIRPB1O00241 398 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 EIF3HO15372 352 aaKnown RBP eCLIP2.02□□□□□ -2.09
RFC4-211ENST00000460408 AIREO43918 545 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 ZNF324O75467 553 aaPredicted RBP2.02□□□□□ -2.09
RFC4-211ENST00000460408 OR2F2O95006 317 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 RAB3DO95716 219 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 AGTP01019 485 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 IGKV3-11P04433 115 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 FABP3P05413 133 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 CALM1P0DP23 149 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 CALM2P0DP24 149 aa2.02□□□□□ -2.09
RFC4-211ENST00000460408 CALM3P0DP25 149 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms