RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 ITGB2P05107 769 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 ISG15P05161 165 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 QDPRP09417 244 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 VSIG8P0DPA2 414 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 FAM57BQ71RH2 274 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 RHOUQ7L0Q8 258 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 NAA40Q86UY6 237 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 TMEM229BQ8NBD8 167 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 VSIG4Q9Y279 399 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 PLEKHA6Q9Y2H5 1048 aa16.1■□□□□ 0.17
HPS3-202ENST00000460120 COL5A1P20908 1838 aaPredicted RBP16.09■□□□□ 0.17
HPS3-202ENST00000460120 IGHG1P01857 330 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 PMP2P02689 132 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 ZNF43P17038 809 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 MMP16P51512 607 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 ZNF121P58317 390 aaPredicted RBP16.09■□□□□ 0.17
HPS3-202ENST00000460120 HLA-BQ31612 363 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 RNASE10Q5GAN6 216 aaKnown RBP16.09■□□□□ 0.17
HPS3-202ENST00000460120 NOXO1Q8NFA2 376 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 OR13C8Q8NGS7 320 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 ANGPTL6Q8NI99 470 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 HLA-CQ95604 372 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 MFFQ9GZY8 342 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 SIT1Q9Y3P8 196 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 CACNA1EQ15878 2313 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 RAB27BO00194 218 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 LDLRAD4O15165 306 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 MPIG6BO95866 241 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 AKR1C4P17516 323 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 RAB3AP20336 220 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 VAMP1P23763 118 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 HRH1P35367 487 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 ZNF93P35789 620 aaPredicted RBP16.09■□□□□ 0.17
HPS3-202ENST00000460120 DHRS2Q13268 280 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 WDSUB1Q8N9V3 476 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 RELL2Q8NC24 303 aaPredicted RBP16.09■□□□□ 0.17
HPS3-202ENST00000460120 TMEM104Q8NE00 496 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 MRGPRX4Q96LA9 322 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 GNRHR2Q96P88 292 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 IFT46Q9NQC8 304 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 GPR84Q9NQS5 396 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 UPB1Q9UBR1 384 aa16.09■□□□□ 0.17
HPS3-202ENST00000460120 SULT2B1O00204 365 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 LGALS8O00214 317 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 HCKP08631 526 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 ZNF735P0CB33 412 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 PGA4P0DJD7 388 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 PGA3P0DJD8 388 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 OR3A4PP47883 348 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 CLDN17P56750 224 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 TOMM20Q15388 145 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 PCK2Q16822 640 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 TMEM81Q6P7N7 255 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 KCTD9Q7L273 389 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 LRRC18Q8N456 261 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 ZNF283Q8N7M2 679 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 OR2M3Q8NG83 312 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 OR8B12Q8NGG6 310 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 TTC9Q92623 222 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 MRPL13Q9BYD1 178 aaKnown RBP16.08■□□□□ 0.16
HPS3-202ENST00000460120 WNT16Q9UBV4 365 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 PI4KAP42356 2102 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 RRASP10301 218 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 CFPP27918 469 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 CD34P28906 385 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 NHLRC3Q5JS37 347 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 C1orf100Q5SVJ3 147 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 BEST3Q8N1M1 668 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 OR5D14Q8NGL3 314 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 CCDC107Q8WV48 283 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 SLC39A7Q92504 469 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 SPACA9Q96E40 222 aaPredicted RBP16.08■□□□□ 0.16
HPS3-202ENST00000460120 TMEM41AQ96HV5 264 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 GPER1Q99527 375 aa16.08■□□□□ 0.16
HPS3-202ENST00000460120 ZNF726A6NNF4 738 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 PATE3B3GLJ2 98 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 TRAF3IP2O43734 574 aaPredicted RBP16.07■□□□□ 0.16
HPS3-202ENST00000460120 C4BPBP20851 252 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 SUMO3P55854 103 aaPredicted RBP16.07■□□□□ 0.16
HPS3-202ENST00000460120 PRSS12P56730 875 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 LY6G6FQ5SQ64 297 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 GLIPR1L1Q6UWM5 242 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 GSG1LQ6UXU4 331 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 NKAIN3Q8N8D7 197 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 SLC22A8Q8TCC7 542 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 ST8SIA4Q92187 359 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 LIN37Q96GY3 246 aaPredicted RBP16.07■□□□□ 0.16
HPS3-202ENST00000460120 DMRTA2Q96SC8 542 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 RAB22AQ9UL26 194 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 RHBDD3Q9Y3P4 386 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 ADAMTS20P59510 1910 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 WDPCPO95876 746 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 NAGAP17050 411 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 AVPR2P30518 371 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 CD96P40200 585 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 GABREP78334 506 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 DHODHQ02127 395 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 ZNF260Q3ZCT1 412 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 FAM74A1Q5RGS3 127 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 THEM4Q5T1C6 240 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms