RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 OR6X1Q8NH79 312 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 MCHR2Q969V1 340 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 BOD1Q96IK1 185 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 COPS4Q9BT78 406 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 CDADC1Q9BWV3 514 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 DUSP21Q9H596 190 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 PQLC2LA1A4F0 135 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 TUSC2O75896 110 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 FADS2O95864 444 aaKnown RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 IGHG1P01857 330 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 HLA-DQA2P01906 255 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 TFP02787 698 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 HTR1FP30939 366 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 SMCO1Q147U7 214 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 RBM48Q5RL73 367 aaKnown RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 TSPO2Q5TGU0 170 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 ETFRF1Q6IPR1 90 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 DPPA2Q7Z7J5 298 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 DOLPP1Q86YN1 238 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 C19orf18Q8NEA5 215 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 OR6N1Q8NGY5 312 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 TSEN15Q8WW01 171 aaKnown RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 Q96MT0 163 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 MFFQ9GZY8 342 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 GSX1Q9H4S2 264 aaPredicted RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 ZNF696Q9H7X3 374 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 RNF122Q9H9V4 155 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 ADGRL4Q9HBW9 690 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 MRPL22Q9NWU5 206 aaKnown RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 SCN3BQ9NY72 215 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 PRSS50Q9UI38 385 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 DAPK2Q9UIK4 370 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 KLHDC2Q9Y2U9 406 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 NBASA2RRP1 2371 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 OR14I1A6ND48 311 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 A6NIZ1 184 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 SLC19A2O60779 497 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 FCER2P06734 321 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 TUBG1P23258 451 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 CRABP1P29762 137 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 MEOX2P50222 304 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 CXCR4P61073 352 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 RAP1BP61224 184 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 RAP1AP62834 184 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 MEDAGQ5VYS4 303 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 VWA1Q6PCB0 445 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 SSX6Q7RTT6 188 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 ERI1Q8IV48 349 aaKnown RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 CNEP1R1Q8N9A8 125 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 CPEB3Q8NE35 698 aaKnown RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 NOXO1Q8NFA2 376 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 METTL9Q9H1A3 318 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 SEC61A2Q9H9S3 476 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 EMC7Q9NPA0 242 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 TUBG2Q9NRH3 451 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 COA4Q9NYJ1 87 aa9.08□□□□□ -0.96
USP39-210ENST00000459775 PLEKHB1Q9UF11 243 aaPredicted RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 RPL36Q9Y3U8 105 aaKnown RBP9.08□□□□□ -0.96
USP39-210ENST00000459775 IGKV3D-15A0A087WSY6 115 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 C12orf71A8MTZ7 269 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 PRR32B1ATL7 298 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 MRPL33O75394 65 aaKnown RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 WNT11O96014 354 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 SERPINA5P05154 406 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 YES1P07947 543 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 OCM2P0CE71 109 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 OCMP0CE72 109 aaPredicted RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 OR8G3PP0DMU2 310 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 AGTR1P30556 359 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 CSNK1A1P48729 337 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 SLC25A1P53007 311 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 RIPPLY3P57055 190 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 ACTBP60709 375 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 ACTA2P62736 377 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 ACTG1P63261 375 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 ACTG2P63267 376 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 ACTC1P68032 377 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 ACTA1P68133 377 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 NEDD8Q15843 81 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 HIST3H3Q16695 136 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 PLAC9Q5JTB6 97 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 OR10H4Q8NGA5 316 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 OR2T4Q8NH00 348 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 GRPEL2Q8TAA5 225 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 FAM57AQ8TBR7 257 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 DGCR14Q96DF8 476 aaKnown RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 AMELYQ99218 206 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 RBM24Q9BX46 236 aaKnown RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 SLC7A10Q9NS82 523 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 GLTPQ9NZD2 209 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 COPS3Q9UNS2 423 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 RBMX2Q9Y388 322 aaKnown RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 TPRKBQ9Y3C4 175 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 GLCEO94923 617 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 PTHP01270 115 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 LCKP06239 509 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 CDK1P06493 297 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 CSF1P09603 554 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms