RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SLC36A2Q495M3 483 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 FAM166AQ6J272 317 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 TMEM53Q6P2H8 277 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 SLC25A47Q6Q0C1 308 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 SLC16A14Q7RTX9 510 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 FGFBP3Q8TAT2 258 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 ZNRF4Q8WWF5 429 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 MNTQ99583 582 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 SYT3Q9BQG1 590 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 RERGLQ9H628 205 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 CHODLQ9H9P2 273 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 TMEM160Q9NX00 188 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 LPAR3Q9UBY5 353 aa15.47■□□□□ 0.07
SQSTM1-204ENST00000453046 RTTNQ86VV8 2226 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 IGKV1D-43A0A0B4J1Z2 117 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 M0R233 179 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 MRPL3P09001 348 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 FAM157CP0CG43 387 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 PCMT1P22061 227 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 KCTD8Q6ZWB6 473 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 SHFQ7M4L6 423 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 SLC16A9Q7RTY1 509 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 DPPA2Q7Z7J5 298 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 GLB1L2Q8IW92 636 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 TIGD4Q8IY51 512 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 ACBD7Q8N6N7 88 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 SLC26A10Q8NG04 563 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 UBASH3BQ8TF42 649 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 INTS14Q96SY0 518 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 KCNN2Q9H2S1 579 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 MS4A5Q9H3V2 200 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 CDH20Q9HBT6 801 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 CHCHD3Q9NX63 227 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 DUSP13Q9UII6 198 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 FZR1Q9UM11 496 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 ERGIC3Q9Y282 383 aa15.46■□□□□ 0.07
SQSTM1-204ENST00000453046 COL6A5A8TX70 2615 aa15.46■□□□□ 0.06
SQSTM1-204ENST00000453046 C12orf71A8MTZ7 269 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 MYL12BO14950 172 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 SELENOFO60613 162 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 PTHP01270 115 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 TFP02787 698 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 OR2T7P0C7T2 308 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 JUNBP17275 347 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 NAA10P41227 235 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 RPL5P46777 297 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 HSF2Q03933 536 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 PLP2Q04941 152 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 DBPQ10586 325 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 XAF1Q6GPH4 301 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 FOXL2NBQ6ZUU3 175 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 ERI1Q8IV48 349 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF584Q8IVC4 421 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 SLC35F2Q8IXU6 374 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 LRRC18Q8N456 261 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF511Q8NB15 262 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 SLC30A7Q8NEW0 376 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 OR10H4Q8NGA5 316 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 OR2T27Q8NH04 317 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 NSMAFQ92636 917 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 MSI2Q96DH6 328 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 MYCBPQ99417 103 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 MND1Q9BWT6 205 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 YIPF3Q9GZM5 350 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 C1orf198Q9H425 327 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 ACOT13Q9NPJ3 140 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 KCNG2Q9UJ96 466 aa15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 COA3Q9Y2R0 106 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 YLPM1P49750 1951 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-204ENST00000453046 IQCMA0A1B0GVH7 501 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 A0A1W2PPW3 197 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 TGFAP01135 160 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 HLA-DQA2P01906 255 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 TFAP2AP05549 437 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 GIFP27352 417 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 LAP3P28838 519 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 ALDH3B1P43353 468 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 ALDH3B2P48448 385 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 ENTPD1P49961 510 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 SELENOVP59797 346 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 EMX1Q04741 257 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 NEDD8Q15843 81 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 MSMPQ1L6U9 139 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 TBC1D28Q2M2D7 210 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 NRN1LQ496H8 165 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 UBE2UQ5VVX9 321 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 RGS7BPQ6MZT1 257 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 LYPD4Q6UWN0 246 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF367Q7RTV3 350 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 LRP11Q86VZ4 500 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 OR1J2Q8NGS2 313 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 OR52N1Q8NH53 320 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 MUL1Q969V5 352 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 MRPL48Q96GC5 212 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 WDR76Q9H967 626 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 MRPL22Q9NWU5 206 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 ERVK13-1Q9NX77 482 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 TMEM14AQ9Y6G1 99 aa15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 FBN1P35555 2871 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-204ENST00000453046 A0A1W2PPL8 197 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms