RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ZC3HAV1LQ96H79 300 aaKnown RBP16.94■□□□□ 0.3
SGCE-207ENST00000447873 PGAM5Q96HS1 289 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 MED18Q9BUE0 208 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 TMED9Q9BVK6 235 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 COMMD4Q9H0A8 199 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 SP140LQ9H930 580 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 NUFIP1Q9UHK0 495 aaKnown RBP16.94■□□□□ 0.3
SGCE-207ENST00000447873 FLNCQ14315 2725 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 DPPA5A6NC42 116 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 PYCARD-AS1I3L0S3 204 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 GPRIN2O60269 458 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 IGLV1-44P01699 117 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 LCATP04180 440 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 CD1AP06126 327 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 CD53P19397 219 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 PSMA1P25786 263 aaKnown RBP16.94■□□□□ 0.3
SGCE-207ENST00000447873 GABRA5P31644 462 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 ZNF83P51522 516 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 HGFACQ04756 655 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 PRSS45Q7RTY3 260 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 ELMOD2Q8IZ81 293 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 TMEM203Q969S6 136 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 PGLYRP3Q96LB9 341 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 FUNDC2Q9BWH2 189 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 CDH20Q9HBT6 801 aa16.94■□□□□ 0.3
SGCE-207ENST00000447873 HCFC1P51610 2035 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 SPTBN1Q01082 2364 aaKnown RBP16.93■□□□□ 0.3
SGCE-207ENST00000447873 IGHV1-18A0A0C4DH31 117 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 M0R1B8 84 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 TBX1O43435 398 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 CECR9P0C854 216 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 GRNP28799 593 aaKnown RBP16.93■□□□□ 0.3
SGCE-207ENST00000447873 RPS25P62851 125 aaKnown RBP16.93■□□□□ 0.3
SGCE-207ENST00000447873 SORDQ00796 357 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 TFF3Q07654 80 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 C3orf36Q3SXR2 165 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 GPR107Q5VW38 600 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 ZNF704Q6ZNC4 412 aaPredicted RBP16.93■□□□□ 0.3
SGCE-207ENST00000447873 WFDC8Q8IUA0 241 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 MS4A15Q8N5U1 240 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 OR8B12Q8NGG6 310 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 OR52H1Q8NGJ2 320 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 WFIKKN1Q96NZ8 548 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 BATF3Q9NR55 127 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 NPAP1Q9NZP6 1156 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 NDRG3Q9UGV2 375 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 ZNF281Q9Y2X9 895 aa16.93■□□□□ 0.3
SGCE-207ENST00000447873 HEATR1Q9H583 2144 aaKnown RBP16.92■□□□□ 0.3
SGCE-207ENST00000447873 TTRP02766 147 aa16.92■□□□□ 0.3
SGCE-207ENST00000447873 TRAM1Q15629 374 aa16.92■□□□□ 0.3
SGCE-207ENST00000447873 CLVS1Q8IUQ0 354 aaPredicted RBP16.92■□□□□ 0.3
SGCE-207ENST00000447873 RDH10Q8IZV5 341 aa16.92■□□□□ 0.3
SGCE-207ENST00000447873 PAQR4Q8N4S7 273 aaPredicted RBP16.92■□□□□ 0.3
SGCE-207ENST00000447873 C1QTNF5Q9BXJ0 243 aa16.92■□□□□ 0.3
SGCE-207ENST00000447873 OR10A2Q9H208 303 aa16.92■□□□□ 0.3
SGCE-207ENST00000447873 SLC24A3Q9HC58 644 aa16.92■□□□□ 0.3
SGCE-207ENST00000447873 ZNF319Q9P2F9 582 aa16.92■□□□□ 0.3
SGCE-207ENST00000447873 SF3B6Q9Y3B4 125 aaKnown RBP16.92■□□□□ 0.3
SGCE-207ENST00000447873 UBR5O95071 2799 aaPredicted RBP16.91■□□□□ 0.3
SGCE-207ENST00000447873 H3BSA7 217 aa16.91■□□□□ 0.3
SGCE-207ENST00000447873 THBDP07204 575 aa16.91■□□□□ 0.3
SGCE-207ENST00000447873 UBCP0CG48 685 aaKnown RBP16.91■□□□□ 0.3
SGCE-207ENST00000447873 GADD45AP24522 165 aa16.91■□□□□ 0.3
SGCE-207ENST00000447873 SNTB1Q13884 538 aaKnown RBP16.91■□□□□ 0.3
SGCE-207ENST00000447873 SNAI3Q3KNW1 292 aa16.91■□□□□ 0.3
SGCE-207ENST00000447873 YIF1BQ5BJH7 314 aa16.91■□□□□ 0.3
SGCE-207ENST00000447873 APOBEC3DQ96AK3 386 aaPredicted RBP16.91■□□□□ 0.3
SGCE-207ENST00000447873 EIF3KQ9UBQ5 218 aaKnown RBP16.91■□□□□ 0.3
SGCE-207ENST00000447873 P2RY10O00398 339 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 HLA-DPB1P04440 258 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 ISG15P05161 165 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 GFOD2Q3B7J2 385 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 TIMM50Q3ZCQ8 353 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 TMEM244Q5VVB8 128 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 SEZ6L2Q6UXD5 910 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 COLCA1Q6ZS62 124 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 COMMD2Q86X83 199 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 ABHD4Q8TB40 342 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 OR51E2Q9H255 320 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 NGBQ9NPG2 151 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 NDUFA13Q9P0J0 144 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 STUB1Q9UNE7 303 aa16.9■□□□□ 0.3
SGCE-207ENST00000447873 SMIM31A0A1B0GVY4 71 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 CCDC160A6NGH7 325 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 SERPINA3P01011 423 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 ANOS1P23352 680 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 WNT5AP41221 380 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 ANKRD13BQ86YJ7 626 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 OR13C5Q8NGS8 318 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 LINC01560Q8TB33 94 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 OR51E1Q8TCB6 317 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 EXOSC4Q9NPD3 245 aaKnown RBP16.89■□□□□ 0.3
SGCE-207ENST00000447873 TBCCD1Q9NVR7 557 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 CEPT1Q9Y6K0 416 aa16.89■□□□□ 0.3
SGCE-207ENST00000447873 A0A0U1RQV5 110 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 LOC100506127A0A0U1RQW1 187 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 C5orf63A6NC05 138 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 TUBAL3A6NHL2 446 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 H3BSH0 61 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 AIREO43918 545 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms