RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 RAB2BQ8WUD1 216 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 ISOC1Q96CN7 298 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 DCLRE1CQ96SD1 692 aaKnown RBP8.28□□□□□ -1.08
NPHP1-207ENST00000445609 CHCHD6Q9BRQ6 235 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 C1QTNF6Q9BXI9 259 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 OR10A4Q9H209 315 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 SP140LQ9H930 580 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 RSL24D1Q9UHA3 163 aaKnown RBP8.28□□□□□ -1.08
NPHP1-207ENST00000445609 SSR3Q9UNL2 185 aa8.28□□□□□ -1.08
NPHP1-207ENST00000445609 LOC100506127A0A0U1RQW1 187 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 FAM90A27PA6NNH2 459 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 GPX5O75715 221 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 GABARAPO95166 117 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 CCL2P13500 99 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 GALP22466 123 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 CCNOP22674 350 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 IDH3GP51553 393 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 FABP5Q01469 135 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 RDH10Q8IZV5 341 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 OR52H1Q8NGJ2 320 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 RPL3LQ92901 407 aaKnown RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 LRRC46Q96FV0 321 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 PGAM5Q96HS1 289 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 EXOSC4Q9NPD3 245 aaKnown RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 KCNJ16Q9NPI9 418 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 TRDV1A0A1B0GX56 115 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 ZNF701M0R085 212 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 SERPINA3P01011 423 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 TTRP02766 147 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 LCATP04180 440 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 ISG15P05161 165 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 UBCP0CG48 685 aaKnown RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 CCKARP32238 428 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 RPS11P62280 158 aaKnown RBP eCLIP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 LSM3P62310 102 aaKnown RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 HGFACQ04756 655 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 PPA1Q15181 289 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 TAB1Q15750 504 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 CTF1Q16619 201 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 TBC1D28Q2M2D7 210 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 TMEM244Q5VVB8 128 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 OR8B12Q8NGG6 310 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 OR1J2Q8NGS2 313 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 RNASE6Q93091 150 aaKnown RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 BCL7BQ9BQE9 202 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 ZNF319Q9P2F9 582 aa8.27□□□□□ -1.09
NPHP1-207ENST00000445609 CRNNQ9UBG3 495 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-207ENST00000445609 CFAP46Q8IYW2 2715 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 ZFYVE26Q68DK2 2539 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 RGS9O75916 674 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-207ENST00000445609 IGLV1-44P01699 117 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 CELA3BP08861 270 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 PPP3CBP16298 524 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 AGAP20933 346 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 FGF9P31371 208 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-207ENST00000445609 ACSM3Q53FZ2 586 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 XKRXQ6PP77 449 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 TMEM91Q6ZNR0 172 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 COLCA1Q6ZS62 124 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 SSX8Q7RTT4 187 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 GPR148Q8TDV2 347 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 RGP1Q92546 391 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-207ENST00000445609 C1QTNF5Q9BXJ0 243 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 OR10A2Q9H208 303 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 SLC24A3Q9HC58 644 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 CACNA1CQ13936 2221 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 NCOA6Q14686 2063 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-207ENST00000445609 A0A0U1RQV5 110 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 NKX2-6A6NCS4 301 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 H3BMQ9 156 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 P2RY10O00398 339 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 GABRPO00591 440 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 TBX1O43435 398 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 SC5DO75845 299 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 INSL4Q14641 139 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 CDSNQ15517 529 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 ALKBH2Q6NS38 261 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 CEACAM19Q7Z692 300 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 MYPOPQ86VE0 399 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-207ENST00000445609 OR13C5Q8NGS8 318 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 OR51E1Q8TCB6 317 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 TRMT61AQ96FX7 289 aaKnown RBP8.26□□□□□ -1.09
NPHP1-207ENST00000445609 CENPOQ9BU64 300 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 TXNL4BQ9NX01 149 aaKnown RBP8.26□□□□□ -1.09
NPHP1-207ENST00000445609 HHLA2Q9UM44 414 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 GSTK1Q9Y2Q3 226 aa8.26□□□□□ -1.09
NPHP1-207ENST00000445609 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 C5orf63A6NC05 138 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 ZG16O60844 167 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 GATBO75879 557 aaKnown RBP8.25□□□□□ -1.09
NPHP1-207ENST00000445609 OCM2P0CE71 109 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 ACHEP22303 614 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 ZNF83P51522 516 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 VBP1P61758 197 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 SNAI3Q3KNW1 292 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 C3orf36Q3SXR2 165 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 Q499Y3 187 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 C22orf42Q6IC83 251 aa8.25□□□□□ -1.09
NPHP1-207ENST00000445609 C22orf34Q6ZV56 151 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms