RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 BCHEP06276 602 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 RETP07949 1114 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 MYL2P10916 166 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 GGT1P19440 569 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 OR1E1P30953 314 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 RRM2P31350 389 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 LONP1P36776 959 aaKnown RBP2.12□□□□□ -2.07
VPS41-207ENST00000439468 NAMPTP43490 491 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 TNNT2P45379 298 aaPredicted RBP2.12□□□□□ -2.07
VPS41-207ENST00000439468 ATP5OP48047 213 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 CX3CR1P49238 355 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 LINC00315P59091 139 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 RAB10P61026 200 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 HERVK_113P61574 105 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 STXBP1P61764 594 aaKnown RBP2.12□□□□□ -2.07
VPS41-207ENST00000439468 RAP1AP62834 184 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 MERTKQ12866 999 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 GINS1Q14691 196 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 PON2Q15165 354 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 OR7A5Q15622 319 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 SPANXN2Q5MJ10 180 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 C1orf185Q5T7R7 199 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 GPR107Q5VW38 600 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 METTL21CQ5VZV1 264 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 CLEC2AQ6UVW9 174 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 TMEM205Q6UW68 189 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 PEX26Q7Z412 305 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 ZNF695Q8IW36 515 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 OR10AD1Q8NGE0 317 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 OR10G4Q8NGN3 311 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 LKAAEAR1Q8TD35 194 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 STARD4Q96DR4 205 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 NEURL3Q96EH8 262 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 ZNF681Q96N22 645 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 TGS1Q96RS0 853 aaKnown RBP2.12□□□□□ -2.07
VPS41-207ENST00000439468 C11orf70Q9BRQ4 267 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 TEKT3Q9BXF9 490 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 SLC25A2Q9BXI2 301 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 UVRAGQ9P2Y5 699 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 DCHS1Q96JQ0 3298 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 TTC28Q96AY4 2481 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 MROH7-TTC4A0A0A0MT08 1334 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 ASTN1O14525 1302 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 TAF1LQ8IZX4 1826 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 C5P01031 1676 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 SLIT3O75094 1523 aa2.12□□□□□ -2.07
VPS41-207ENST00000439468 CARMIL3Q8ND23 1372 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 PLEKHG2Q9H7P9 1386 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 IFT172Q9UG01 1749 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 CFAP47Q6ZTR5 3102 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 TNS3Q68CZ2 1445 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 KIAA1107Q9UPP5 1409 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 CACNA1BQ00975 2339 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 IQGAP3Q86VI3 1631 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 IGKV2D-24A0A075B6R9 120 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 IGHV3-74A0A0B4J1X5 117 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 A0A1W2PP18 115 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 SLC9A3R1O14745 358 aaPredicted RBP2.11□□□□□ -2.07
VPS41-207ENST00000439468 HUS1O60921 280 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 FKBP6O75344 327 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 RDH16O75452 317 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 FLOT1O75955 427 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 KRT14P02533 472 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 SERPINE2P07093 398 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 UBTFL6P0CB48 400 aaPredicted RBP2.11□□□□□ -2.07
VPS41-207ENST00000439468 OR8G3PP0DMU2 310 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 GALP22466 123 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 FOXN2P32314 431 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 SLC1A2P43004 574 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 MNAT1P51948 309 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 UBE2MP61081 183 aaKnown RBP2.11□□□□□ -2.07
VPS41-207ENST00000439468 SP4Q02446 784 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 IRF8Q02556 426 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 TCP10Q12799 353 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 ZNF266Q14584 549 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 XKR4Q5GH76 650 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 TMEM53Q6P2H8 277 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 BZW1Q7L1Q6 419 aaKnown RBP2.11□□□□□ -2.07
VPS41-207ENST00000439468 EIF3MQ7L2H7 374 aaKnown RBP2.11□□□□□ -2.07
VPS41-207ENST00000439468 CMC1Q7Z7K0 106 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 RIMKLAQ8IXN7 391 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 SAXO1Q8IYX7 474 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 MCUR1Q96AQ8 359 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 DYNLL2Q96FJ2 89 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 ZNF317Q96PQ6 595 aaPredicted RBP2.11□□□□□ -2.07
VPS41-207ENST00000439468 ACP6Q9NPH0 428 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 ISYNA1Q9NPH2 558 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 TMED5Q9Y3A6 229 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 MAPK8IP3Q9UPT6 1336 aa2.11□□□□□ -2.07
VPS41-207ENST00000439468 CDH23Q9H251 3354 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 CRB1P82279 1406 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 RIMS2Q9UQ26 1411 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 ARID1AO14497 2285 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 TRBV9A0A0B4J1U6 114 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 NCBP2LA6PVI3 153 aaKnown RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 K7EMT4 169 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms