RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MGMTP16455 207 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 OMGP23515 440 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 SFTPDP35247 375 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 NDUFA6P56556 154 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 RAB30Q15771 203 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 WDR38Q5JTN6 314 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 WBP2NLQ6ICG8 309 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 C11orf87Q6NUJ2 197 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 BIVMQ86UB2 503 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 SPICQ8N5J4 248 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 OR2G2Q8NGZ5 317 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 RTN4RQ9BZR6 473 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 GSN-AS1Q9NRJ2 163 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 COL4A3Q01955 1670 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 A0A087WUJ7 227 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 TRAV1-2A0A0B4J238 106 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 A0A1W2PPE2 198 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 STK17BO94768 372 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF823P16415 610 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 ELFN2Q5R3F8 820 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 DPY19L2P2Q6ZN68 376 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 NUDT9Q9BW91 350 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 RHOFQ9HBH0 211 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF701Q9NV72 531 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 MED29Q9NX70 200 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 KLRF1Q9NZS2 232 aa8.92□□□□□ -0.98
CDC42SE1-202ENST00000439374 DOCK7Q96N67 2140 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 A0A1W2PP11 408 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 A0A1W2PPC4 97 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF749O43361 778 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 XRCC2O43543 280 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 TNFSF14O43557 240 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 SNAPINO95295 136 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 GIMD1P0DJR0 217 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 FBLP22087 321 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 FMODQ06828 376 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 ACER2Q5QJU3 275 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 LY6G6FQ5SQ64 297 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 CDPF1Q6NVV7 123 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 JMJD6Q6NYC1 403 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF595Q8IYB9 648 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 SLC2A12Q8TD20 617 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 SCARF2Q96GP6 870 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 RGCCQ9H4X1 137 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZFP57Q9NU63 452 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 PARPBPQ9NWS1 579 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 VSX1Q9NZR4 365 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 UPB1Q9UBR1 384 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 FREM2Q5SZK8 3169 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 LOC101059948A0A1B0GTJ6 334 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 SRPX2O60687 465 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 AHSA1O95433 338 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 FOSL2P15408 326 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 CD96P40200 585 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 DHPSP49366 369 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 PNLIPRP2P54317 469 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 PRPS1P60891 318 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 ACY1Q03154 408 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 PABPC1L2AQ5JQF8 200 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 RPL7L1Q6DKI1 246 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 FJX1Q86VR8 437 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 TOMM40LQ969M1 308 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZDHHC12Q96GR4 267 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 TCTN2Q96GX1 697 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 SPACA1Q9HBV2 294 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 CHRNA9Q9UGM1 479 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 NDRG3Q9UGV2 375 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 VSIG4Q9Y279 399 aa8.91□□□□□ -0.98
CDC42SE1-202ENST00000439374 FAM221BA6H8Z2 402 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 BCL2L11O43521 198 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF354AO60765 605 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 GLCEO94923 617 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 OR2A4O95047 310 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 RAB40ALP0C0E4 278 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 FOLR1P15328 257 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 S1PR1P21453 382 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 AGTR1P30556 359 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 RGS19P49795 217 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 ACKR1Q16570 336 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 PAPD4Q6PIY7 484 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 RAB40AQ8WXH6 277 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 SGK3Q96BR1 496 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF524Q96C55 264 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 OR2A7Q96R45 310 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF700Q9H0M5 742 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 PIGMQ9H3S5 423 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 HEATR1Q9H583 2144 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 COA3Q9Y2R0 106 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 B3GALT1Q9Y5Z6 326 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 ARHGAP21Q5T5U3 1957 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 SNRPGP15A8MWD9 76 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 J3QRE1 110 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 XRCC3O43542 346 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 WDPCPO95876 746 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 PNPP00491 289 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 RFC3P40938 356 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 GPR3P46089 330 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 MFGE8Q08431 387 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 CEBPEQ15744 281 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms