RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TMEM81Q6P7N7 255 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 CORO6Q6QEF8 472 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 OR51A4Q8NGJ6 313 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 OR51S1Q8NGJ8 323 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 EDARADDQ8WWZ3 215 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 APOBEC3DQ96AK3 386 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 SEC22AQ96IW7 307 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 C11orf54Q9H0W9 315 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 ZNF391Q9UJN7 358 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 Q8IYB0 196 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 GAB3Q8WWW8 586 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 FUT6P51993 359 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 TAS2R45P59539 299 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 OR52N5Q8NH56 324 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 HPSE2Q8WWQ2 592 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 MRPS24Q96EL2 167 aaKnown RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 CIB3Q96Q77 187 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 PPIL1Q9Y3C6 166 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 DVL1O14640 695 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 NKX2-1P43699 371 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 DVL1P1P54792 670 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 OLIG3Q7RTU3 272 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 BSCL2Q96G97 398 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 NAA50Q9GZZ1 169 aaKnown RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 UFSP2Q9NUQ7 469 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 SLC25A37Q9NYZ2 338 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 NXPH3O95157 252 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 HTRA4P83105 476 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 FLI1Q01543 452 aaPredicted RBP14.37□□□□□ -0.11
PTPN13-204ENST00000436978 SLCO4A1Q96BD0 722 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 SLC17A1Q14916 467 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 SOHLH1Q5JUK2 328 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 TCTN3Q6NUS6 607 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 DBX2Q6ZNG2 339 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 OR10K1Q8NGX5 313 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 SLC23A1Q9UHI7 598 aa14.37□□□□□ -0.11
PTPN13-204ENST00000436978 IGHV3-15A0A0B4J1V0 119 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 SSTP61278 116 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 DHODHQ02127 395 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 LRRC10Q5BKY1 277 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 ANKRD16Q6P6B7 361 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 TSEN54Q7Z6J9 526 aaKnown RBP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 FBXL6Q8N531 539 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 SUMF1Q8NBK3 374 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 OR13C8Q8NGS7 320 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 WBP1LQ9NX94 342 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 QPCTLQ9NXS2 382 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 GDF2Q9UK05 429 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 SIRPB1O00241 398 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 SOX7Q9BT81 388 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 PUS1Q9Y606 427 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 KLK10O43240 276 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 MBP02144 154 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 LIPAP38571 399 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 ZNF121P58317 390 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 LRRC37AA6NMS7 1700 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 TRGV5A0A0B4J1U4 118 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 HIST2H3AQ71DI3 136 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 FBXL14Q8N1E6 418 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 MEIKINA0A087WXM9 373 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 SLC35A2P78381 396 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 TMEM99Q8N816 258 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 SEC22CQ9BRL7 303 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 TMEM30AQ9NV96 361 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 FAM157BP0CG42 384 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 FOXC1Q12948 553 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 PCK2Q16822 640 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 ZNF2Q9BSG1 426 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 JTBO76095 146 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 CD1EP15812 388 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 ABCD3P28288 659 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 TOMM34Q15785 309 aaPredicted RBP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 PNLIPRP3Q17RR3 467 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 SLC38A6Q8IZM9 456 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 C1QTNF6Q9BXI9 259 aa14.36□□□□□ -0.11
PTPN13-204ENST00000436978 HINT3Q9NQE9 182 aaKnown RBP14.36□□□□□ -0.11
PTPN13-204ENST00000436978 LGALS8O00214 317 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 TRAF3IP2O43734 574 aaPredicted RBP14.35□□□□□ -0.11
PTPN13-204ENST00000436978 OR10K2Q6IF99 312 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 NDFIP1Q9BT67 221 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 TAS2R5Q9NYW4 299 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 ST8SIA3O43173 380 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 ISL1P61371 349 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 DUSP2Q05923 314 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 GALMQ96C23 342 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 FLVCR1Q9Y5Y0 555 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 GIPP09681 153 aaPredicted RBP14.35□□□□□ -0.11
PTPN13-204ENST00000436978 TNFRSF1AP19438 455 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 NME2P22392 152 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 OR10A3P58181 314 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 OR2A1Q8NGT9 310 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 ADAM19Q9H013 955 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 KCNE1BA0A087WTH5 132 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 FOXJ3Q9UPW0 622 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 RPS19P39019 145 aaKnown RBP14.35□□□□□ -0.11
PTPN13-204ENST00000436978 TMEM211Q6ICI0 200 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 ALKAL2Q6UX46 152 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 GPX8Q8TED1 209 aa14.35□□□□□ -0.11
PTPN13-204ENST00000436978 CHST2Q9Y4C5 530 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms