RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 FAM169BQ8N8A8 192 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 ISOC1Q96CN7 298 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 DGCR14Q96DF8 476 aaKnown RBP19.99■□□□□ 0.79
CPSF4-204ENST00000436336 POM121L2Q96KW2 1035 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 SP140LQ9H930 580 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 RSL24D1Q9UHA3 163 aaKnown RBP19.99■□□□□ 0.79
CPSF4-204ENST00000436336 SMG1Q96Q15 3661 aaKnown RBP19.99■□□□□ 0.79
CPSF4-204ENST00000436336 SERPINA3P01011 423 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 TTRP02766 147 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 SLC2A1P11166 492 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 GALP22466 123 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 NR4A1P22736 598 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 CCKARP32238 428 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 FAM57BQ71RH2 274 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 CA5BP1Q8WTZ4 195 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 RPL3LQ92901 407 aaKnown RBP19.99■□□□□ 0.79
CPSF4-204ENST00000436336 MUCL1Q96DR8 90 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 CHCHD6Q9BRQ6 235 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 CRNNQ9UBG3 495 aaPredicted RBP19.99■□□□□ 0.79
CPSF4-204ENST00000436336 SSR3Q9UNL2 185 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 HIVEP3Q5T1R4 2406 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 TRDV1A0A1B0GX56 115 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 FAM90A27PA6NNH2 459 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 GPX5O75715 221 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 AGFG2O95081 481 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 ISG15P05161 165 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 UBCP0CG48 685 aaKnown RBP19.98■□□□□ 0.79
CPSF4-204ENST00000436336 FABP5Q01469 135 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 HGFACQ04756 655 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 CTF1Q16619 201 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 SLC30A7Q8NEW0 376 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 OR8B12Q8NGG6 310 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 ABHD4Q8TB40 342 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 MS4A3Q96HJ5 214 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 PGAM5Q96HS1 289 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 CFAP46Q8IYW2 2715 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 ZFYVE26Q68DK2 2539 aa19.98■□□□□ 0.79
CPSF4-204ENST00000436336 DIDO1Q9BTC0 2240 aaKnown RBP19.97■□□□□ 0.79
CPSF4-204ENST00000436336 C5orf49A4QMS7 147 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 RGS9O75916 674 aaPredicted RBP19.97■□□□□ 0.79
CPSF4-204ENST00000436336 IDH3GP51553 393 aaPredicted RBP19.97■□□□□ 0.79
CPSF4-204ENST00000436336 RPS11P62280 158 aaKnown RBP eCLIP19.97■□□□□ 0.79
CPSF4-204ENST00000436336 PPA1Q15181 289 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 TAB1Q15750 504 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 TBC1D28Q2M2D7 210 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 ODF4Q2M2E3 257 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 TMEM244Q5VVB8 128 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 OR52H1Q8NGJ2 320 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 LRRC46Q96FV0 321 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 EXOSC4Q9NPD3 245 aaKnown RBP19.97■□□□□ 0.79
CPSF4-204ENST00000436336 N6AMT1Q9Y5N5 214 aa19.97■□□□□ 0.79
CPSF4-204ENST00000436336 LOC100506127A0A0U1RQW1 187 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 GABRPO00591 440 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 SC5DO75845 299 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 CCNOP22674 350 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 SSX8Q7RTT4 187 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 OR1J2Q8NGS2 313 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 RGP1Q92546 391 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-204ENST00000436336 IGLV1-44P01699 117 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 LCATP04180 440 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 CELA3BP08861 270 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 CCL2P13500 99 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 FGF9P31371 208 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-204ENST00000436336 TMEM91Q6ZNR0 172 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 RDH10Q8IZV5 341 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 OR13C5Q8NGS8 318 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 RNASE6Q93091 150 aaKnown RBP19.96■□□□□ 0.79
CPSF4-204ENST00000436336 C12orf43Q96C57 262 aaKnown RBP19.96■□□□□ 0.79
CPSF4-204ENST00000436336 TRMT61AQ96FX7 289 aaKnown RBP19.96■□□□□ 0.79
CPSF4-204ENST00000436336 C1QTNF6Q9BXI9 259 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 C1QTNF5Q9BXJ0 243 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 SLC24A3Q9HC58 644 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 TXNL4BQ9NX01 149 aaKnown RBP19.96■□□□□ 0.79
CPSF4-204ENST00000436336 ZNF319Q9P2F9 582 aa19.96■□□□□ 0.79
CPSF4-204ENST00000436336 H3BMQ9 156 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 PPP3CBP16298 524 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 AGAP20933 346 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 ACHEP22303 614 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 LSM3P62310 102 aaKnown RBP19.95■□□□□ 0.78
CPSF4-204ENST00000436336 C3orf36Q3SXR2 165 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 ACSM3Q53FZ2 586 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 COLCA1Q6ZS62 124 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 MYPOPQ86VE0 399 aaPredicted RBP19.95■□□□□ 0.78
CPSF4-204ENST00000436336 GPR148Q8TDV2 347 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 CENPOQ9BU64 300 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 OR10A2Q9H208 303 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 KCNJ16Q9NPI9 418 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 HHLA2Q9UM44 414 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 HCFC1P51610 2035 aa19.95■□□□□ 0.78
CPSF4-204ENST00000436336 A0A0U1RQV5 110 aa19.94■□□□□ 0.78
CPSF4-204ENST00000436336 NKX2-6A6NCS4 301 aa19.94■□□□□ 0.78
CPSF4-204ENST00000436336 P2RY10O00398 339 aa19.94■□□□□ 0.78
CPSF4-204ENST00000436336 TBX1O43435 398 aa19.94■□□□□ 0.78
CPSF4-204ENST00000436336 ANOS1P23352 680 aa19.94■□□□□ 0.78
CPSF4-204ENST00000436336 SNAI3Q3KNW1 292 aa19.94■□□□□ 0.78
CPSF4-204ENST00000436336 GSTK1Q9Y2Q3 226 aa19.94■□□□□ 0.78
CPSF4-204ENST00000436336 TRBV5-5A0A0J9YX44 114 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 GATBO75879 557 aaKnown RBP19.93■□□□□ 0.78
CPSF4-204ENST00000436336 INSL4Q14641 139 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 Q499Y3 187 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms