RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 NCK1P16333 377 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 RHCEP18577 417 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 IFNGR2P38484 337 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 GSK3BP49841 420 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 ERFP50548 548 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 HNRNPA0Q13151 305 aaKnown RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 FHL1Q13642 323 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 KLF17Q5JT82 389 aaPredicted RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 OTPQ5XKR4 325 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 LEG1Q6P5S2 330 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 CORO6Q6QEF8 472 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 C17orf107Q6ZR85 190 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 DCDC5Q6ZRR9 648 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 SLC15A3Q8IY34 581 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 OR4C15Q8NGM1 316 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 ZNF420Q8TAQ5 688 aaPredicted RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 SPTSSAQ969W0 71 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 MCUR1Q96AQ8 359 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 CMTM5Q96DZ9 223 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 ERMAPQ96PL5 475 aaPredicted RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 SIGLEC11Q96RL6 698 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 GPX7Q96SL4 187 aaPredicted RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 ATF6BQ99941 703 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 SLC30A2Q9BRI3 323 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 NUDT16L1Q9BRJ7 211 aaKnown RBP6.5□□□□□ -1.37
VPS50-203ENST00000436177 IFT27Q9BW83 186 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 C1QTNF5Q9BXJ0 243 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 ZNF696Q9H7X3 374 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 FN3KRPQ9HA64 309 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 SPAG4Q9NPE6 437 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 NRIP3Q9NQ35 241 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 ADA2Q9NZK5 511 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 SIGLEC7Q9Y286 467 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 V9GYQ6 96 aa6.5□□□□□ -1.37
VPS50-203ENST00000436177 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 TRBV4-1A0A0J9YWV2 114 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 A0A1B0GUS0 222 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 GGT3PA6NGU5 568 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 A6NLC8 198 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 IQCF6A8MYZ5 107 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 NME4O00746 187 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 KNG1P01042 644 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 ZNF823P16415 610 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 ZNF26P17031 533 aaPredicted RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 CD80P33681 288 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 GGT2P36268 569 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 TPTEP56180 551 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 FGF12P61328 243 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 SPIBQ01892 262 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 PAX8Q06710 450 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 MZT1Q08AG7 82 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 COX10Q12887 443 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 TRAP1Q12931 704 aaKnown RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 SLC9A3R2Q15599 337 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 OR8G1Q15617 311 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 OR8B8Q15620 311 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 MEP1BQ16820 701 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 ZNF181Q2M3W8 571 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 ZNF404Q494X3 552 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 CCDC92Q53HC0 331 aaPredicted RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 CD276Q5ZPR3 534 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 HACD2Q6Y1H2 254 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 C9orf139Q6ZV77 190 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 PGAP1Q75T13 922 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 LINC00346Q8IVM7 164 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 CELF2-AS1Q8N7Q2 184 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 BOLLQ8N9W6 283 aaKnown RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 PROKR2Q8NFJ6 384 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 SLC26A10Q8NG04 563 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 OR52L1Q8NGH7 329 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 OR4F5Q8NH21 305 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 OR52J3Q8NH60 311 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 ERGIC1Q969X5 290 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 UPRTQ96BW1 309 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 TSSK2Q96PF2 358 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 TMEM246Q9BRR3 403 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 PCGF1Q9BSM1 259 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 ADAT1Q9BUB4 502 aaKnown RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 SLC22A4Q9H015 551 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 TMEM165Q9HC07 324 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 SRA1Q9HD15 236 aaKnown RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 TRIM36Q9NQ86 728 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 RPRD1BQ9NQG5 326 aaKnown RBP6.49□□□□□ -1.37
VPS50-203ENST00000436177 TNFRSF19Q9NS68 423 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 UFSP2Q9NUQ7 469 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 NDUFAF4Q9P032 175 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 KCNG2Q9UJ96 466 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 TMCC3Q9ULS5 477 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 LHFPL6Q9Y693 200 aa6.49□□□□□ -1.37
VPS50-203ENST00000436177 DYSFO75923 2080 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 IGLV1-36A0A0B4J1U3 117 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 KIR2DS1A0A191URI9 304 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 hCG_1807616A0A1W2PRN6 198 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 H0YL77 283 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 M0R135 149 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 IMPA2O14732 288 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 HOXA3O43365 443 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms