RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 MEX3BQ6ZN04 569 aaKnown RBP9.84□□□□□ -0.83
LINC00539-203ENST00000434601 Q6ZT83 130 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 BTLAQ7Z6A9 289 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 CDH24Q86UP0 819 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF676Q8N7Q3 588 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ACBD4Q8NC06 268 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 NAXEQ8NCW5 288 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 IL17RDQ8NFM7 739 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ABHD4Q8TB40 342 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 NANOS1Q8WY41 292 aaKnown RBP9.84□□□□□ -0.83
LINC00539-203ENST00000434601 RGP1Q92546 391 aaPredicted RBP9.84□□□□□ -0.83
LINC00539-203ENST00000434601 KCNJ15Q99712 375 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 SFXN3Q9BWM7 321 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 OR2H1Q9GZK4 316 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 SLC24A3Q9HC58 644 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF224Q9NZL3 707 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 OR52A1Q9UKL2 312 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 TIMM10BQ9Y5J6 103 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
LINC00539-203ENST00000434601 ZFHX3Q15911 3703 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 OR6C6A6NF89 314 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 SYNGR3O43761 229 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 UBL3O95164 117 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 CGAP01215 116 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 MMP7P09237 267 aaPredicted RBP9.83□□□□□ -0.84
LINC00539-203ENST00000434601 PATE4P0C8F1 98 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 IGHV1-2P23083 117 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 CTSSP25774 331 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 CEACAM8P31997 349 aaPredicted RBP9.83□□□□□ -0.84
LINC00539-203ENST00000434601 PRKXP51817 358 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF121P58317 390 aaPredicted RBP9.83□□□□□ -0.84
LINC00539-203ENST00000434601 RPS11P62280 158 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00539-203ENST00000434601 TUBA1BP68363 451 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 PSG4Q00888 419 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 TGFBR3Q03167 851 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 ECH1Q13011 328 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 INSL4Q14641 139 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 CDSNQ15517 529 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 ACSM3Q53FZ2 586 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF774Q6NX45 483 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 PAMR1Q6UXH9 720 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 TUBA1AQ71U36 451 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 CEACAM19Q7Z692 300 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 DPPA2Q7Z7J5 298 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF283Q8N7M2 679 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 OR1F12Q8NHA8 337 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 FGFBP3Q8TAT2 258 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 DYNC2LI1Q8TCX1 351 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 SPTSSAQ969W0 71 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 STARD4Q96DR4 205 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 WNT5BQ9H1J7 359 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 G6PC2Q9NQR9 355 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 PLSCR4Q9NRQ2 329 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 GALNT8Q9NY28 637 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
LINC00539-203ENST00000434601 NUFIP1Q9UHK0 495 aaKnown RBP9.83□□□□□ -0.84
LINC00539-203ENST00000434601 SLC22A13Q9Y226 551 aa9.83□□□□□ -0.84
LINC00539-203ENST00000434601 FREM1Q5H8C1 2179 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 NF1P21359 2839 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 TRBV5-5A0A0J9YX44 114 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF879B4DU55 563 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 M0R135 149 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 DVL2O14641 736 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 GATBO75879 557 aaKnown RBP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 IL1AP01583 271 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 APOC1P02654 83 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ISG15P05161 165 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 UBCP0CG48 685 aaKnown RBP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ACHEP22303 614 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 CRYGSP22914 178 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 MYL9P24844 172 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 CHRNB4P30926 498 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 OTX1P32242 354 aaPredicted RBP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 HTR5AP47898 357 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 TESK1Q15569 626 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 DGUOKQ16854 277 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 KRTAP27-1Q3LI81 207 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 TBRG1Q3YBR2 411 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 Q499Y3 187 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 HIKESHIQ53FT3 197 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ZMAT1Q5H9K5 638 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 TMEM53Q6P2H8 277 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF704Q6ZNC4 412 aaPredicted RBP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ELMOD2Q8IZ81 293 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 GABRG1Q8N1C3 465 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 C1orf162Q8NEQ5 155 aaPredicted RBP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 GPR148Q8TDV2 347 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 PHYHIPQ92561 330 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 THRSPQ92748 146 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 BCL2L2Q92843 193 aaPredicted RBP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF799Q96GE5 643 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 OR14A2Q96R54 314 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 MED18Q9BUE0 208 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 PBOV1Q9GZY1 135 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 OPN3Q9H1Y3 402 aaPredicted RBP9.82□□□□□ -0.84
LINC00539-203ENST00000434601 RNF121Q9H920 327 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 BRD7Q9NPI1 651 aa9.82□□□□□ -0.84
LINC00539-203ENST00000434601 ATPIF1Q9UII2 106 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms