RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 MSR1P21757 451 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 CD82P27701 267 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 EFNB2P52799 333 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 SUCLG1P53597 346 aaKnown RBP11.35□□□□□ -0.59
DDX56-204ENST00000431640 ACTBP60709 375 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 RAC3P60763 192 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 ACTG1P63261 375 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 SPOCK1Q08629 439 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 CLN3Q13286 438 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 MFAP5Q13361 173 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 ACER2Q5QJU3 275 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 ATP1A1-AS1Q5TC04 95 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 RAB12Q6IQ22 244 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 JMJD6Q6NYC1 403 aaPredicted RBP11.35□□□□□ -0.59
DDX56-204ENST00000431640 ZNF813Q6ZN06 617 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 CFAP77Q6ZQR2 320 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 FOXL2NBQ6ZUU3 175 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 PGAP1Q75T13 922 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 SLC22A24Q8N4F4 322 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 GJC3Q8NFK1 279 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 OR9K2Q8NGE7 335 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 GIMAP1Q8WWP7 306 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 TMEM246Q9BRR3 403 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 NOX3Q9HBY0 568 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
DDX56-204ENST00000431640 ZNF107Q9UII5 783 aaPredicted RBP11.35□□□□□ -0.59
DDX56-204ENST00000431640 RAB22AQ9UL26 194 aa11.35□□□□□ -0.59
DDX56-204ENST00000431640 A0A1B0GUH1 482 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 C21orf140B9A014 251 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 LDLRAD4O15165 306 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 SSNA1O43805 119 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 RAMP1O60894 148 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 NDUFB6O95139 128 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 APOC1P02654 83 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 IL5P05113 134 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 AKAIN1P0CW23 69 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 CDAP32320 146 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 GNALP38405 381 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 CYB561P49447 251 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 ZNF84P51523 738 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 MECP2P51608 486 aaKnown RBP11.34□□□□□ -0.59
DDX56-204ENST00000431640 SGCAQ16586 387 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 ST3GAL2Q16842 350 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 PCGF3Q3KNV8 242 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 LYPD6Q86Y78 171 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 CCDC54Q8NEL0 328 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 GCDHQ92947 438 aaPredicted RBP11.34□□□□□ -0.59
DDX56-204ENST00000431640 DACT3Q96B18 629 aaPredicted RBP11.34□□□□□ -0.59
DDX56-204ENST00000431640 NELFAQ9H3P2 528 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 P4HTMQ9NXG6 502 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 ASH2LQ9UBL3 628 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 ZNF222Q9UK12 451 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 CEP295Q9C0D2 2601 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 EML6Q6ZMW3 1958 aa11.34□□□□□ -0.59
DDX56-204ENST00000431640 A0A0J9YW62 118 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 A0A1B0GTI1 187 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 LINC01387J3KSC0 135 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ICMTO60725 284 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 SNAPC5O75971 98 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 BPNT1O95861 308 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 SULT1A3P0DMM9 295 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 SULT1A4P0DMN0 295 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ZNF20P17024 532 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 CNR1P21554 472 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ID4P47928 161 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 GSK3AP49840 483 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 CARD18P57730 90 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 Q0VFX4 171 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 PLA2G7Q13093 441 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 FAM189A2Q15884 450 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 DOK3Q7L591 496 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 OR51A2Q8NGJ7 313 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 OR14L1PQ8NHC6 308 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 GRPEL2Q8TAA5 225 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 GPX8Q8TED1 209 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 OR10A4Q9H209 315 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 METTL17Q9H7H0 456 aaPredicted RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 NKIRAS2Q9NYR9 191 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
DDX56-204ENST00000431640 SLC5A6Q9Y289 635 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 MSRB2Q9Y3D2 182 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 DMXL2Q8TDJ6 3036 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 CACNA1AO00555 2505 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 MEIKINA0A087WXM9 373 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 SNRPGP15A8MWD9 76 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 G3V3Y1 287 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 FABP7O15540 132 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 DHHO43323 396 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ALDOBP05062 364 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 LPLP06858 475 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 PTHLHP12272 177 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 CCL1P22362 96 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ENPP1P22413 925 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 S100A1P23297 94 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 RCVRNP35243 200 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 PRKXP51817 358 aa11.33□□□□□ -0.6
DDX56-204ENST00000431640 ZNF121P58317 390 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms