RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 MRPL22Q9NWU5 206 aaKnown RBP11.57□□□□□ -0.56
PTCH1-207ENST00000429896 LYRM1O43325 122 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 ERP29P30040 261 aaKnown RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 IL13RA1P78552 427 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 TBCEQ15813 527 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 GSG1Q2KHT4 349 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 OR2G6Q5TZ20 316 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 MRPL14Q6P1L8 145 aaKnown RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 TMEM251Q8N6I4 163 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 DAZAP1Q96EP5 407 aaKnown RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 K7EPK0 472 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 M6PRP20645 277 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 NKX6-1P78426 367 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 SPACA3Q8IXA5 215 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 FAM71E2Q8N5Q1 922 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 SLC38A9Q8NBW4 561 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 MSI2Q96DH6 328 aaKnown RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 TIMD4Q96H15 378 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 AKIRIN1Q9H9L7 192 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 QPCTLQ9NXS2 382 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 UPK1BO75841 260 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 RPP30P78346 268 aaKnown RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 GDPGP1Q6ZNW5 385 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 FJX1Q86VR8 437 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 STEAP2Q8NFT2 490 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 ADIPOR1Q96A54 375 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 PSORS1C1Q9UIG5 152 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 NME2P1O60361 137 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 AKAIN1P0CW23 69 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 NME2P22392 152 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 GIFP27352 417 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 C21orf33P30042 268 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 MLLT11Q13015 90 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 ALKBH1Q13686 389 aaKnown RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 CORO6Q6QEF8 472 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 FNDC9Q8TBE3 224 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 METTL9Q9H1A3 318 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 PAHP00439 452 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 ANKRD34AQ69YU3 496 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 DESI1Q6ICB0 168 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 OR52I1Q8NGK6 324 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 OR2T35Q8NGX2 323 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 RHOXF1Q8NHV9 184 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 SECTM1Q8WVN6 248 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 THAP7Q9BT49 309 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-207ENST00000429896 B9D1Q9UPM9 204 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 PIGLQ9Y2B2 252 aa11.56□□□□□ -0.56
PTCH1-207ENST00000429896 ZC3H12DA2A288 527 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 PLPP3O14495 311 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 OR7C1O76099 320 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 SLC34A2O95436 690 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 FAM157BP0CG42 384 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 HINT3Q9NQE9 182 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 LIPT2A6NK58 231 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ZAR1LA6NP61 321 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 PMS2P2O95744 297 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 CBR1P16152 277 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 MTCP1P56278 107 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 SORCS2Q96PQ0 1159 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 A0A1W2PQ09 198 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 C1orf196B1AJZ1 125 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 DVL1O14640 695 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 CHATP28329 748 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 DVL1P1P54792 670 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 NDUFA6P56556 154 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ELFN2Q5R3F8 820 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ANKRD16Q6P6B7 361 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 TIPARPQ7Z3E1 657 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 CLDN22Q8N7P3 220 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ESRP2Q9H6T0 727 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 C20orf141Q9NUB4 165 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 A8MXE2 369 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ANXA7P20073 488 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 MRPS34P82930 218 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 FAHD1Q6P587 224 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 RBMXL3Q8N7X1 1067 aaKnown RBP11.55□□□□□ -0.56
PTCH1-207ENST00000429896 SEMA6DQ8NFY4 1073 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 M0R135 149 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 DEFA4P12838 97 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 TCF15Q12870 199 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 PRSS53Q2L4Q9 553 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 TUSC5Q8IXB3 177 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ZNF799Q96GE5 643 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 TSSK2Q96PF2 358 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 ATF6BQ99941 703 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 RTL8AQ9BWD3 113 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 SAMD10Q9BYL1 202 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 HIPK2Q9H2X6 1198 aa11.55□□□□□ -0.56
PTCH1-207ENST00000429896 NKX6-3A6NJ46 265 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 RECKO95980 971 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 HNF1AP20823 631 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 CDAP32320 146 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 LTBQ06643 244 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 BAXQ07812 192 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 OR8G1Q15617 311 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 BHLHA15Q7RTS1 189 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-207ENST00000429896 ADGRG3Q86Y34 549 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms