RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 C10orf128Q5T292 105 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 AGAP6Q5VW22 663 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 RNF144BQ7Z419 303 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 KRT77Q7Z794 578 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF101Q8IZC7 436 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 CELF2-AS1Q8N7Q2 184 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMEM45BQ96B21 275 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 NDEL1Q9GZM8 345 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 WNT5BQ9H1J7 359 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 ISYNA1Q9NPH2 558 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 HAO2Q9NYQ3 351 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 SSR3Q9UNL2 185 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 PROCRQ9UNN8 238 aa8.3□□□□□ -1.08
HMGCLL1-206ENST00000428842 SHISA3A0PJX4 238 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SSX4O60224 188 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZFPL1O95159 310 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 IL1AP01583 271 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR2T7P0C7T2 308 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 GABRA1P14867 456 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 CEACAM8P31997 349 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SOX2P48431 317 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 IDH3GP51553 393 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 RAB1AP62820 205 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF79Q15937 498 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 TBRG1Q3YBR2 411 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF684Q5T5D7 378 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 VASH1Q7L8A9 365 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 MDP1Q86V88 176 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ST6GALNAC3Q8NDV1 305 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR2T27Q8NH04 317 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 RGP1Q92546 391 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC25A46Q96AG3 418 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SRRQ9GZT4 340 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 RNF121Q9H920 327 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 C14orf119Q9NWQ9 140 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 PARPBPQ9NWS1 579 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 TXNL4BQ9NX01 149 aaKnown RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 CRIM1Q9NZV1 1036 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ERRFI1Q9UJM3 462 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 MOKQ9UQ07 419 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 MED13LQ71F56 2210 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SETXQ7Z333 2677 aaKnown RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 NOTCH2Q04721 2471 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ACOD1A6NK06 481 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 FAM157BP0CG42 384 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 KIR3DL2P43630 455 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF84P51523 738 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 HOXA4Q00056 320 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 MXD1Q05195 221 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 GPR50Q13585 617 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 CARTPTQ16568 116 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 WDR38Q5JTN6 314 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SLC35D3Q5M8T2 416 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMEM53Q6P2H8 277 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMPRSS11AQ6ZMR5 421 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 Q6ZT83 130 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 KLHL36Q8N4N3 616 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 ZNF433Q8N7K0 673 aaPredicted RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR1K1Q8NGR3 316 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 GHSRQ92847 366 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 DMRTA2Q96SC8 542 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 TPK1Q9H3S4 243 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMEM165Q9HC07 324 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 MOV10Q9HCE1 1003 aaKnown RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 PLSCR4Q9NRQ2 329 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SNTG1Q9NSN8 517 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 SF3B6Q9Y3B4 125 aaKnown RBP8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 CMAHPQ9Y471 501 aa8.29□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMEM129A0AVI4 362 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 IRGMA1A4Y4 181 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 C5orf49A4QMS7 147 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 SNTNA6NMZ2 147 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 NCR1O76036 304 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 MMP7P09237 267 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 GSTT2P0CG29 244 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 GSTT2BP0CG30 244 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 GUCA1AP43080 201 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 CA7P43166 264 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 RFX2P48378 723 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 MRPS34P82930 218 aaKnown RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 FABP5Q01469 135 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 HLXQ14774 488 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 GABRA6Q16445 453 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 LCN1P1Q5VSP4 162 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 FAM27BQ5VT28 67 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 FAM57BQ71RH2 274 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 LAX1Q8IWV1 398 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 OR2AJ1Q8NGZ0 328 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 LINC01560Q8TB33 94 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 DVL3Q92997 716 aaPredicted RBP8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 MED18Q9BUE0 208 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 POFUT1Q9H488 388 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 TRBV2A0A0J9YWF9 115 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 TMEM269A0A1B0GVZ9 245 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 A8MXE2 369 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 P2RY10O00398 339 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 SGCEO43556 437 aa8.28□□□□□ -1.08
HMGCLL1-206ENST00000428842 CDRT1O95170 752 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms