RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 LRRTM1Q86UE6 522 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 ZNF679Q8IYX0 411 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 TMEM104Q8NE00 496 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 PLPP5Q8NEB5 264 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 DYRK2Q92630 601 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 SCMH1Q96GD3 660 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 SLC6A7Q99884 636 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 C12orf4Q9NQ89 552 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 AKAP7Q9P0M2 348 aaPredicted RBP7.43□□□□□ -1.22
CD44-208ENST00000428726 NUBP2Q9Y5Y2 271 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 HS3ST3B1Q9Y662 390 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 LRBAP50851 2863 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 IGF2RP11717 2491 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 MED13LQ71F56 2210 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 TMEM272A0A1B0GTI8 110 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 CDK2AP1O14519 115 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 SYT7O43581 403 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 MPIG6BO95866 241 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 ITGB2P05107 769 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 CXCL2P19875 107 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 MNDAP41218 407 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 DCAF12L2Q5VW00 463 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 TIPARPQ7Z3E1 657 aaKnown RBP7.43□□□□□ -1.22
CD44-208ENST00000428726 UEVLDQ8IX04 471 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 MAML2Q8IZL2 1156 aaPredicted RBP7.43□□□□□ -1.22
CD44-208ENST00000428726 ZNF441Q8N8Z8 693 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 OR10S1Q8NGN2 331 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 MIB2Q96AX9 1013 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 ZNF436Q9C0F3 470 aaPredicted RBP7.43□□□□□ -1.22
CD44-208ENST00000428726 ARL6Q9H0F7 186 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 CNTD2Q9H8S5 307 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 SDHAF3Q9NRP4 125 aa7.43□□□□□ -1.22
CD44-208ENST00000428726 NCOR2Q9Y618 2525 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 NSG1A0A0A6YYJ2 146 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 ZNF726A6NNF4 738 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 L7N2F9 121 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 WISP2O76076 250 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 HCKP08631 526 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 NTF4P34130 210 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 HOXA4Q00056 320 aaPredicted RBP7.42□□□□□ -1.22
CD44-208ENST00000428726 DYRK1AQ13627 763 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 AANATQ16613 207 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 KCTD9Q7L273 389 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 TMPRSS7Q7RTY8 843 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 C1orf210Q8IVY1 113 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 BHLHE23Q8NDY6 225 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 OR52N5Q8NH56 324 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 OR14L1PQ8NHC6 308 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 AKR7LQ8NHP1 331 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 SMIM4Q8WVI0 70 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 TMEM41AQ96HV5 264 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 DMRTA2Q96SC8 542 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 DHRS9Q9BPW9 319 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 B3GAT1Q9P2W7 334 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 UBQLN2Q9UHD9 624 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 WIF1Q9Y5W5 379 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 C7orf66A4D0T2 115 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 D6RAR5 112 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 FTCDNL1E5RQL4 147 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 HSPB6O14558 160 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 CTAG2O75638 210 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 APOC3P02656 99 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 AMY2AP04746 511 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 RAB40ALP0C0E4 278 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 ACSM4P0C7M7 580 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 VSIG10L2P0DP72 767 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 FAHP16930 419 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 VAMP1P23763 118 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 DLSTP36957 453 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 C1QL2Q7Z5L3 287 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 ZNF227Q86WZ6 799 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 ESX1Q8N693 406 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 ZNF519Q8TB69 540 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 RAB40AQ8WXH6 277 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 RANBP3Q9H6Z4 567 aaPredicted RBP7.42□□□□□ -1.22
CD44-208ENST00000428726 EXO5Q9H790 373 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 CHST11Q9NPF2 352 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 GPR84Q9NQS5 396 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 ZC4H2Q9NQZ6 224 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 HPF1Q9NWY4 346 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 KCNN3Q9UGI6 736 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 DKKL1Q9UK85 242 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 SRPK3Q9UPE1 567 aa7.42□□□□□ -1.22
CD44-208ENST00000428726 SHANK1Q9Y566 2161 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TRBV5-5A0A0J9YX44 114 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 LIPT2A6NK58 231 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 TMEM212A6NML5 194 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 ATP6V1G2-DDX39BF2Z307 99 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 GOSR2O14653 212 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 SULT1B1O43704 296 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 NPIPB7O75200 414 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 RBBP9O75884 186 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 DXOO77932 396 aaKnown RBP7.41□□□□□ -1.22
CD44-208ENST00000428726 STK17BO94768 372 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PMP2P02689 132 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 EDN3P14138 238 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 B4GALT1P15291 398 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 AKR1C4P17516 323 aa7.41□□□□□ -1.22
CD44-208ENST00000428726 PTGDSP41222 190 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms