RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 A0A1W2PQL4 384 aaPredicted RBP12.48□□□□□ -0.41
SGCE-204ENST00000428696 DAPL1A0PJW8 107 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 E9PQ18 207 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 OVOL3O00110 214 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 SSX4O60224 188 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 LY6HO94772 140 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 APOC1P02654 83 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 GNAO1P09471 354 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 OR2T7P0C7T2 308 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 OPRL1P41146 370 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 ZNF121P58317 390 aaPredicted RBP12.48□□□□□ -0.41
SGCE-204ENST00000428696 PSG7Q13046 419 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 SMN1Q16637 294 aaKnown RBP12.48□□□□□ -0.41
SGCE-204ENST00000428696 SNAI3Q3KNW1 292 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 SLC25A30Q5SVS4 291 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 IZUMO2Q6UXV1 221 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 USP51Q70EK9 711 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 MRPL21Q7Z2W9 205 aaKnown RBP12.48□□□□□ -0.41
SGCE-204ENST00000428696 C1orf174Q8IYL3 243 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 RFLNBQ8N5W9 214 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 BHLHE23Q8NDY6 225 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 OR2T27Q8NH04 317 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 LRP12Q9Y561 859 aa12.48□□□□□ -0.41
SGCE-204ENST00000428696 H0YAE9 185 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 PHYHO14832 338 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 SPRY3O43610 288 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 RPP14O95059 124 aaKnown RBP12.47□□□□□ -0.41
SGCE-204ENST00000428696 KRT8P05787 483 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 EVX1P49640 407 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 RIDAP52758 137 aaKnown RBP12.47□□□□□ -0.41
SGCE-204ENST00000428696 ZNF91Q05481 1191 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 TMED1Q13445 227 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 KRTAP27-1Q3LI81 207 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 OR2T2Q6IF00 324 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 YIPF7Q8N8F6 280 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 OR2AE1Q8NHA4 323 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 GTF3AQ92664 365 aaKnown RBP12.47□□□□□ -0.41
SGCE-204ENST00000428696 MNTQ99583 582 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 MS4A5Q9H3V2 200 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 SP140LQ9H930 580 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 RPL36Q9Y3U8 105 aaKnown RBP12.47□□□□□ -0.41
SGCE-204ENST00000428696 MAP1AP78559 2803 aaPredicted RBP12.47□□□□□ -0.41
SGCE-204ENST00000428696 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
SGCE-204ENST00000428696 TMEM269A0A1B0GVZ9 245 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 C5orf63A6NC05 138 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 GGT3PA6NGU5 568 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 DBTP11182 482 aaKnown RBP12.46□□□□□ -0.41
SGCE-204ENST00000428696 GABRB1P18505 474 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 TUBG1P23258 451 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 ZNF81P51508 661 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 TSTQ16762 297 aaKnown RBP12.46□□□□□ -0.41
SGCE-204ENST00000428696 TIGD6Q17RP2 521 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 GLYATL3Q5SZD4 288 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 MBNL2Q5VZF2 373 aaKnown RBP12.46□□□□□ -0.41
SGCE-204ENST00000428696 PLEKHG7Q6ZR37 379 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 PGAP1Q75T13 922 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 ZNF679Q8IYX0 411 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 APH1BQ8WW43 257 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 SPRYD4Q8WW59 207 aaPredicted RBP12.46□□□□□ -0.41
SGCE-204ENST00000428696 HAVCR1Q96D42 359 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 LGALS12Q96DT0 336 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 OR8B4Q96RC9 309 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 FOXC2Q99958 501 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 GSX2Q9BZM3 304 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 OR10A2Q9H208 303 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 MSL2Q9HCI7 577 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 TUBG2Q9NRH3 451 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 ZNF701Q9NV72 531 aaPredicted RBP12.46□□□□□ -0.41
SGCE-204ENST00000428696 PURGQ9UJV8 347 aaKnown RBP12.46□□□□□ -0.41
SGCE-204ENST00000428696 GNG8Q9UK08 70 aa12.46□□□□□ -0.41
SGCE-204ENST00000428696 PRR32B1ATL7 298 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 H7C417 338 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ZNF254O75437 659 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 FADS2O95864 444 aaKnown RBP12.45□□□□□ -0.42
SGCE-204ENST00000428696 IGHV3-13P01766 116 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 RAC2P15153 192 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 ZNF92Q03936 586 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 CDK5R2Q13319 367 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 IL18R1Q13478 541 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 GK2Q14410 553 aaPredicted RBP12.45□□□□□ -0.42
SGCE-204ENST00000428696 KLHL22Q53GT1 634 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 Q5PR19 223 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 COLCA1Q6ZS62 124 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 RHOUQ7L0Q8 258 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 SSX6Q7RTT6 188 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 LHFPL3Q86UP9 236 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 IGFBPL1Q8WX77 278 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 TFAP2CQ92754 450 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 SORCS2Q96PQ0 1159 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 NIPAL2Q9H841 368 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 FBXO9Q9UK97 447 aaPredicted RBP12.45□□□□□ -0.42
SGCE-204ENST00000428696 PCDHGB1Q9Y5G3 927 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 CREBBPQ92793 2442 aa12.45□□□□□ -0.42
SGCE-204ENST00000428696 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms