RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 FAHD2BQ6P2I3 314 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-205ENST00000427897 Q6ZR03 302 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 DCXRQ7Z4W1 244 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 NAA40Q86UY6 237 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 ZNF511Q8NB15 262 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 SPRYD4Q8WW59 207 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-205ENST00000427897 TMEM158Q8WZ71 300 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 SLCO4A1Q96BD0 722 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 ZNF799Q96GE5 643 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 FAHD2AQ96GK7 314 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 MAP6Q96JE9 813 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 OR2V2Q96R30 315 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 DDOQ99489 341 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 COPS4Q9BT78 406 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 RBM4Q9BWF3 364 aaKnown RBP17.5■□□□□ 0.39
HSPG2-205ENST00000427897 CMC2Q9NRP2 79 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 TMEM106BQ9NUM4 274 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 NPTNQ9Y639 398 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 MALRD1Q5VYJ5 2156 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 FCGR1AP12314 374 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 SRP9P49458 86 aaKnown RBP17.49■□□□□ 0.39
HSPG2-205ENST00000427897 RAD23AP54725 363 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 PGAP1Q75T13 922 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 IQCF1Q8N6M8 205 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 ZNRF4Q8WWF5 429 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 PLEKHA8Q96JA3 519 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 KIF17Q9P2E2 1029 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 DNAJB9Q9UBS3 223 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 AP4S1Q9Y587 144 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 COMMD3-BMI1R4GMX3 469 aa17.49■□□□□ 0.39
HSPG2-205ENST00000427897 FAM183AA6NL82 134 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 IQCF6A8MYZ5 107 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 DEAF1O75398 565 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-205ENST00000427897 CLUP10909 449 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 ANXA8P13928 327 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 SLC15A1P46059 708 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 RSPO1Q2MKA7 263 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-205ENST00000427897 SPRNQ5BIV9 151 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 ZFP1Q6P2D0 407 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 LYPD4Q6UWN0 246 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 COLCA1Q6ZS62 124 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 KLHL36Q8N4N3 616 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 ZNF283Q8N7M2 679 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 OR10AD1Q8NGE0 317 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 OR6N2Q8NGY6 317 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 SLAMF6Q96DU3 332 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 OR51V1Q9H2C8 321 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 MED20Q9H944 212 aa17.48■□□□□ 0.39
HSPG2-205ENST00000427897 PNRC2Q9NPJ4 139 aaKnown RBP17.48■□□□□ 0.39
HSPG2-205ENST00000427897 SONP18583 2426 aaKnown RBP17.47■□□□□ 0.39
HSPG2-205ENST00000427897 ERICH4A6NGS2 130 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 PRR23D1E9PI22 279 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-205ENST00000427897 IFNL4K9M1U5 179 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 PHF1O43189 567 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-205ENST00000427897 IGHV2-5P01817 119 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 HMGN1P05114 100 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 PRR23D2P0DMB1 279 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-205ENST00000427897 OSMP13725 252 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 PRKACGP22612 351 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 HSD11B1P28845 292 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 PRKXP51817 358 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 EIF2B1Q14232 305 aaKnown RBP17.47■□□□□ 0.39
HSPG2-205ENST00000427897 GINS1Q14691 196 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 DRAM2Q6UX65 266 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 CXXC5Q7LFL8 322 aaKnown RBP17.47■□□□□ 0.39
HSPG2-205ENST00000427897 TMEM179BQ7Z7N9 219 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 ERI1Q8IV48 349 aaKnown RBP17.47■□□□□ 0.39
HSPG2-205ENST00000427897 INTS14Q96SY0 518 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 METRNQ9UJH8 293 aa17.47■□□□□ 0.39
HSPG2-205ENST00000427897 DYSFO75923 2080 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 GGT3PA6NGU5 568 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 ZNF878C9JN71 531 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 PLPP2O43688 288 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 IRF2P14316 349 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 FASP25445 335 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 GSTT1P30711 240 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 SCGB2A2Q13296 93 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 GK2Q14410 553 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-205ENST00000427897 LIPNQ5VXI9 398 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 SPATC1Q76KD6 591 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 SPICQ8N5J4 248 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 TEX29Q8N6K0 151 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 MEGF10Q96KG7 1140 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 KCNJ15Q99712 375 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 SLC30A2Q9BRI3 323 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 NMNAT2Q9BZQ4 307 aa17.46■□□□□ 0.39
HSPG2-205ENST00000427897 DDX28Q9NUL7 540 aaKnown RBP17.46■□□□□ 0.39
HSPG2-205ENST00000427897 NOP16Q9Y3C1 178 aaKnown RBP17.46■□□□□ 0.39
HSPG2-205ENST00000427897 ABCA2Q9BZC7 2435 aa17.46■□□□□ 0.38
HSPG2-205ENST00000427897 A0A0G2JMP0 313 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 A0A0X1KG70 313 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 LRRC30A6NM36 301 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 H0YL77 283 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 TIPRLO75663 272 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 PNPP00491 289 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 THBS2P35442 1172 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 PRSS12P56730 875 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 GRB2P62993 217 aaKnown RBP17.45■□□□□ 0.38
HSPG2-205ENST00000427897 KRTAP27-1Q3LI81 207 aa17.45■□□□□ 0.38
HSPG2-205ENST00000427897 KLHL12Q53G59 568 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms