RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 UNC119Q13432 240 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 GRK1Q15835 563 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 KIAA2026Q5HYC2 2103 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 STEAP1BQ6NZ63 245 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ANKRD16Q6P6B7 361 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ALKAL2Q6UX46 152 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 SEH1LQ96EE3 360 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRN-204ENST00000423636 PCED1AQ9H1Q7 454 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 PROK2Q9HC23 129 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 CYB5R1Q9UHQ9 305 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 OTOGLQ3ZCN5 2332 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ESPL1Q14674 2120 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 A0A096LPE4 126 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 A0A1W2PPZ6 126 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 NPIPA2E9PIF3 369 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 NPIPA3F8WFD2 350 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 GUSBP08236 651 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 PGA4P0DJD7 388 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 PGA3P0DJD8 388 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 GABREP78334 506 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 DYRK2Q92630 601 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 NAT6Q93015 286 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ST6GALNAC5Q9BVH7 336 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ALKBH4Q9NXW9 302 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 PLEK2Q9NYT0 353 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 SEMA5BQ9P283 1151 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ADAMTS20P59510 1910 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 CRTAPO75718 401 aaPredicted RBP10.54□□□□□ -0.72
PTPRN-204ENST00000423636 ITGB2P05107 769 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 SERPINA2P20848 420 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 TNK1Q13470 666 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 GLIPR1L1Q6UWM5 242 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 TRAPPC6BQ86SZ2 158 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 FJX1Q86VR8 437 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 RPS4Y2Q8TD47 263 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 ABHD3Q8WU67 409 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 DEPPQ9NTK1 212 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 FAM206AQ9NX38 181 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 FOXJ2Q9P0K8 574 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 C19orf25Q9UFG5 118 aaPredicted RBP10.54□□□□□ -0.72
PTPRN-204ENST00000423636 PLEKHA6Q9Y2H5 1048 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 SHANK1Q9Y566 2161 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 C7orf66A4D0T2 115 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 ZIC3O60481 467 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 JMJD7P0C870 316 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 PTBP1P26599 531 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRN-204ENST00000423636 FOLR3P41439 243 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 SSR4P51571 173 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 SUCLG1P53597 346 aaKnown RBP10.54□□□□□ -0.72
PTPRN-204ENST00000423636 GABRG1Q8N1C3 465 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 SLC43A2Q8N370 569 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 PAQR4Q8N4S7 273 aaPredicted RBP10.54□□□□□ -0.72
PTPRN-204ENST00000423636 ELP5Q8TE02 316 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 ASB17Q8WXJ9 295 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 SLC25A28Q96A46 364 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 B3GALT5Q9Y2C3 310 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 LOXL2Q9Y4K0 774 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 ACACAQ13085 2346 aa10.54□□□□□ -0.72
PTPRN-204ENST00000423636 LNP1A1A4G5 178 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 G3V3Q6 166 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 ICMTO60725 284 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 RAB40ALP0C0E4 278 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 CSRP1P21291 193 aaKnown RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 AVPR2P30518 371 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF93P35789 620 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 P2RY4P51582 365 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 BTG1P62324 171 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 CXADRP78310 365 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 SORDQ00796 357 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 TMPPEQ6ZT21 453 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 NOXO1Q8NFA2 376 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 RAB40AQ8WXH6 277 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 PGAM5Q96HS1 289 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 HYLS1Q96M11 299 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 SPTA1P02549 2419 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 H7C417 338 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 VSIG8P0DPA2 414 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 LCN1P31025 176 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 HRH1P35367 487 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 GMFBP60983 142 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 ROM1Q03395 351 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 NKAPLQ5M9Q1 402 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 FOXRED2Q8IWF2 684 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 BPIFB2Q8N4F0 458 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 FGFBP3Q8TAT2 258 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 RNF133Q8WVZ7 376 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 MRGPRX4Q96LA9 322 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 OR2M2Q96R28 347 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 HDHD3Q9BSH5 251 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 EVA1AQ9H8M9 152 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 CRLF2Q9HC73 371 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF275Q9NSD4 429 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 MTFP1Q9UDX5 166 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 TP53I11O14683 189 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 RGS13O14921 159 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 SPRY1O43609 319 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 CREBL2O60519 120 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 LDOC1O95751 146 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 CXCL2P19875 107 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms