RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TNFAIP6P98066 277 aaPredicted RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 EIF2B1Q14232 305 aaKnown RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 HLXQ14774 488 aaPredicted RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 PCK2Q16822 640 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 SLC35D3Q5M8T2 416 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 C6orf52Q5T4I8 152 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 FAM166AQ6J272 317 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 DRAM2Q6UX65 266 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 PGAP1Q75T13 922 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 CXXC5Q7LFL8 322 aaKnown RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 DPY19L4Q7Z388 723 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 PEG10Q86TG7 708 aaKnown RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 CPOQ8IVL8 374 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 OR2Z1Q8NG97 314 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 LRTOMTQ8WZ04 291 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 YIPF5Q969M3 257 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 SLAMF6Q96DU3 332 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 CENPNQ96H22 339 aaPredicted RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 KCNJ15Q99712 375 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 C1QTNF5Q9BXJ0 243 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 SP140LQ9H930 580 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 DDX28Q9NUL7 540 aaKnown RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 KCNS2Q9ULS6 477 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 C2CD3Q4AC94 2353 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 CSPG4Q6UVK1 2322 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 LRP5LA4QPB2 252 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 LILRA1O75019 489 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 APOC1P02654 83 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 CD55P08174 381 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
USP49-204ENST00000423567 HSD11B1P28845 292 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 ACTR3P61158 418 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 CDK5R2Q13319 367 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 PTGES3Q15185 160 aaKnown RBP9.3□□□□□ -0.92
USP49-204ENST00000423567 TRIP10Q15642 601 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 KRTAP27-1Q3LI81 207 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 TMEM255AQ5JRV8 349 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 LINC01590Q5TEZ4 76 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 LCN1P1Q5VSP4 162 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 TMEM236Q5W0B7 351 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 OR2T2Q6IF00 324 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 ZFP1Q6P2D0 407 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 COLCA1Q6ZS62 124 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 SPATC1Q76KD6 591 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 MRPL21Q7Z2W9 205 aaKnown RBP9.3□□□□□ -0.92
USP49-204ENST00000423567 AMIGO2Q86SJ2 522 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 OR5AS1Q8N127 324 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 ZNF283Q8N7M2 679 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 OR8G5Q8NG78 346 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 OR13G1Q8NGZ3 307 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 SPRYD4Q8WW59 207 aaPredicted RBP9.3□□□□□ -0.92
USP49-204ENST00000423567 PYDC1Q8WXC3 89 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 CCL17Q92583 94 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 RAB1CQ92928 201 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 ZMYND19Q96E35 227 aaPredicted RBP9.3□□□□□ -0.92
USP49-204ENST00000423567 RAB3IPQ96QF0 476 aaPredicted RBP9.3□□□□□ -0.92
USP49-204ENST00000423567 OSBPL10Q9BXB5 764 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 GABARAPL1Q9H0R8 117 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 SEMA6AQ9H2E6 1030 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 TOR3AQ9H497 397 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 NARFLQ9H6Q4 476 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
USP49-204ENST00000423567 H2AFY2Q9P0M6 372 aaPredicted RBP9.3□□□□□ -0.92
USP49-204ENST00000423567 WIPF1O43516 503 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 LMX1BO60663 402 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 CRLF1O75462 422 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 RP2O75695 350 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 TGFAP01135 160 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 IGFBP5P24593 272 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 SRP9P49458 86 aaKnown RBP9.29□□□□□ -0.92
USP49-204ENST00000423567 PRKXP51817 358 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 RAD23AP54725 363 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 MVKQ03426 396 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 GK2Q14410 553 aaPredicted RBP9.29□□□□□ -0.92
USP49-204ENST00000423567 KPNB1Q14974 876 aaKnown RBP9.29□□□□□ -0.92
USP49-204ENST00000423567 RSPO1Q2MKA7 263 aaPredicted RBP9.29□□□□□ -0.92
USP49-204ENST00000423567 KDM4DQ6B0I6 523 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.29□□□□□ -0.92
USP49-204ENST00000423567 LINC01356Q8N9X3 169 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 OR10S1Q8NGN2 331 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 ST7LQ8TDW4 575 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 THEM6Q8WUY1 208 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 ABHD6Q9BV23 337 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 MARCH7Q9H992 704 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 TMEM100Q9NV29 134 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 IL19Q9UHD0 177 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 NOP16Q9Y3C1 178 aaKnown RBP9.29□□□□□ -0.92
USP49-204ENST00000423567 N6AMT1Q9Y5N5 214 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 ORC6Q9Y5N6 252 aa9.29□□□□□ -0.92
USP49-204ENST00000423567 SETD2Q9BYW2 2564 aaPredicted RBP9.29□□□□□ -0.92
USP49-204ENST00000423567 RTTNQ86VV8 2226 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 ISPDA4D126 451 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 GGT3PA6NGU5 568 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 SAC3D1A6NKF1 404 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 IQCF6A8MYZ5 107 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 TBX1O43435 398 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 XRCC2O43543 280 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 SELENOFO60613 162 aa9.28□□□□□ -0.92
USP49-204ENST00000423567 MITFO75030 526 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms