RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 ZNF474Q6S9Z5 364 aaPredicted RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 OR13C5Q8NGS8 318 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 SLC7A6Q92536 515 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 RNF166Q96A37 237 aaPredicted RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 DCUN1D5Q9BTE7 237 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 OR10A2Q9H208 303 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 DCSTAMPQ9H295 470 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 MOV10Q9HCE1 1003 aaKnown RBP14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 G6PC2Q9NQR9 355 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 ELOVL5Q9NYP7 299 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 HHLA2Q9UM44 414 aa14.93□□□□□ -0.02
CCDC28B-202ENST00000421922 A0A1B0GUH1 482 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 LOC107986453A0A1B0GWG9 222 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 A0A1W2PPW3 197 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 A8MXE2 369 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 ZNF879B4DU55 563 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 ATE1O95260 518 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 CD2P06729 351 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 DBHP09172 617 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 CRYGSP22914 178 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 STOMP27105 288 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 Q499Y3 187 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 FJX1Q86VR8 437 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 ELMOD2Q8IZ81 293 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 IL17RDQ8NFM7 739 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 STEAP2Q8NFT2 490 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 OR52H1Q8NGJ2 320 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 NDNFQ8TB73 568 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 DCLRE1CQ96SD1 692 aaKnown RBP14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 DHDHQ9UQ10 334 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 BSNQ9UPA5 3926 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 A0A1W2PR80 420 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 C5orf49A4QMS7 147 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 OR5H1A6NKK0 313 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 P2RY10O00398 339 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 SYT7O43581 403 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 LCATP04180 440 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 ACSM4P0C7M7 580 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 PSMB1P20618 241 aaKnown RBP14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 CALRP27797 417 aaKnown RBP14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 OTX1P32242 354 aaPredicted RBP14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 SPCS2Q15005 226 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 TBC1D28Q2M2D7 210 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 ZMAT1Q5H9K5 638 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 MTFR2Q6P444 385 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 GALNT11Q8NCW6 608 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 OR8B12Q8NGG6 310 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 OR1J2Q8NGS2 313 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 OR13C3Q8NGS6 347 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 ASB5Q8WWX0 329 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 PHYHIPQ92561 330 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 MUCL1Q96DR8 90 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 LRRC46Q96FV0 321 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 TRMT61AQ96FX7 289 aaKnown RBP14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 OR14A2Q96R54 314 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 RNF167Q9H6Y7 350 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 NOX3Q9HBY0 568 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 PTTG2Q9NZH5 202 aa14.92□□□□□ -0.02
CCDC28B-202ENST00000421922 POLEQ07864 2286 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 MYO7BQ6PIF6 2116 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 ZNF503-AS2A6NEH8 195 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 H3BSH0 61 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 CASKO14936 926 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 TTRP02766 147 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 PAX7P23759 505 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 CHRNB4P30926 498 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 UGT2B10P36537 528 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 TGFBR1P36897 503 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 SOX2P48431 317 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 IDH3GP51553 393 aaPredicted RBP14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 HSD17B12Q53GQ0 312 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 STAC2Q6ZMT1 411 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 TMEM91Q6ZNR0 172 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 RDH10Q8IZV5 341 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 RELL2Q8NC24 303 aaPredicted RBP14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 CPEB3Q8NE35 698 aaKnown RBP14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 SLC30A7Q8NEW0 376 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 PPP1R14AQ96A00 147 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 BOD1Q96IK1 185 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 USB1Q9BQ65 265 aaKnown RBP14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 SLITRK2Q9H156 845 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 CDH20Q9HBT6 801 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 B3GNT2Q9NY97 397 aa14.91□□□□□ -0.02
CCDC28B-202ENST00000421922 SPENQ96T58 3664 aaKnown RBP14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 MYO18BQ8IUG5 2567 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 CDRT1O95170 752 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 SERPINA5P05154 406 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 ISG15P05161 165 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 ZNF12P17014 697 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 SOX6P35712 828 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 TLE1Q04724 770 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 INSL4Q14641 139 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 SLC25A35Q3KQZ1 300 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 TIMM23BQ5SRD1 257 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 PRR7Q8TB68 274 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 OR51E1Q8TCB6 317 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 RGP1Q92546 391 aaPredicted RBP14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 S100PBPQ96BU1 408 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 KCNS3Q9BQ31 491 aa14.9□□□□□ -0.02
CCDC28B-202ENST00000421922 ACTR6Q9GZN1 396 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms