RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 KRT74Q7RTS7 529 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 CXorf67Q86X51 503 aaPredicted RBP12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 WDR31Q8NA23 367 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 PLPP7Q8NBV4 271 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 STEAP2Q8NFT2 490 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 KBTBD8Q8NFY9 601 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 RPL3LQ92901 407 aaKnown RBP12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 TRMT61AQ96FX7 289 aaKnown RBP12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF799Q96GE5 643 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 KCTD7Q96MP8 289 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 PSMG3-AS1Q96PY0 264 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 PDCD1LG2Q9BQ51 273 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 CHCHD6Q9BRQ6 235 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 CENPOQ9BU64 300 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 C1QTNF5Q9BXJ0 243 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 PBOV1Q9GZY1 135 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 RGCCQ9H4X1 137 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 TRAV1-2A0A0B4J238 106 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 TRGV8A0A0C4DH27 118 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 IQCMA0A1B0GVH7 501 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 CIB4A0PJX0 185 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF503-AS2A6NEH8 195 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 CCDC160A6NGH7 325 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 GABRPO00591 440 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ARL6IP5O75915 188 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 IL1AP01583 271 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 IGLV1-44P01699 117 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 HLA-HP01893 362 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 TTRP02766 147 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF12P17014 697 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF14P17017 642 aaPredicted RBP12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 TUBG1P23258 451 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 MTNR1BP49286 362 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF121P58317 390 aaPredicted RBP12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 PLP2Q04941 152 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 CNPY1Q3B7I2 92 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 HIKESHIQ53FT3 197 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZMAT1Q5H9K5 638 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 BCL2L15Q5TBC7 163 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 C3P1Q6ZMU1 363 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 BHLHA15Q7RTS1 189 aaPredicted RBP12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF584Q8IVC4 421 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF676Q8N7Q3 588 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 RGP1Q92546 391 aaPredicted RBP12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 SPSB4Q96A44 273 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 C10orf35Q96D05 121 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 TMED9Q9BVK6 235 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 RNF121Q9H920 327 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 TUBG2Q9NRH3 451 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 PTTG2Q9NZH5 202 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 HHLA2Q9UM44 414 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 A3GALT2U3KPV4 340 aa12.4□□□□□ -0.42
SHMT1P1-201ENST00000419974 TRBV5-7A0A0A0MS05 114 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF879B4DU55 563 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 LYZL6O75951 148 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 AGAP20933 346 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 STOMP27105 288 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 CHRNB4P30926 498 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 HTR5AP47898 357 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 UQCRFS1P47985 274 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 NCS1P62166 190 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 C9orf135Q5VTT2 229 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 SPATC1Q76KD6 591 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZNF283Q8N7M2 679 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 RELL2Q8NC24 303 aaPredicted RBP12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 DYNC2LI1Q8TCX1 351 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 ASB5Q8WWX0 329 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 ZCCHC4Q9H5U6 513 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLC22A13Q9Y226 551 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 SLC25A15Q9Y619 301 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 NCOA6Q14686 2063 aaPredicted RBP12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 FREM1Q5H8C1 2179 aa12.39□□□□□ -0.43
SHMT1P1-201ENST00000419974 LOC100509620A0A075B734 347 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 LOC100506127A0A0U1RQW1 187 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 PNMA8CA0A1B0GUJ8 204 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 ANKRD61A6NGH8 418 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 RAD51DO75771 328 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 CD37P11049 281 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 CD79AP11912 226 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 PPP3CBP16298 524 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 BMP5P22003 454 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 CFL1P23528 166 aaKnown RBP12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 PCSK6P29122 969 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 HOXC12P31275 282 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 VBP1P61758 197 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 SPCS2Q15005 226 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 CEACAM19Q7Z692 300 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 MDP1Q86V88 176 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 LIX1LQ8IVB5 337 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR1J2Q8NGS2 313 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 DERL3Q96Q80 235 aa12.38□□□□□ -0.43
SHMT1P1-201ENST00000419974 OR10A2Q9H208 303 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms