RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 APOC3P02656 99 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 BMP2P12643 396 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 TPT1P13693 172 aaKnown RBP15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 CSF2RBP32927 897 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 CASP3P42574 277 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 RAB11AP62491 216 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 KIRREL2Q6UWL6 708 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 SYT9Q86SS6 491 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 CRYM-AS1A6NIL9 109 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 PCSK6P29122 969 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 GPM6AP51674 278 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 PRRX1P54821 245 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 BEX5Q5H9J7 111 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 NKAIN3Q8N8D7 197 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 DNAJB12Q9NXW2 375 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 LRP5LA4QPB2 252 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 ADH4P08319 380 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 PPP3CBP16298 524 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 GCAP28676 217 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 PDLIM4P50479 330 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 TAS2R19P59542 299 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 CMBLQ96DG6 245 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 CACNG2Q9Y698 323 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 MEIS3P1A6NDR6 274 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 AQP7O14520 342 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 KCNIP2Q9NS61 270 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 ASB1Q9Y576 335 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 A6NIN4 97 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 ADAM20O43506 726 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNF17P17021 662 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 SRPXP78539 464 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 GLIPR1L1Q6UWM5 242 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 FRZBQ92765 325 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 OPALINQ96PE5 141 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 CXXC4Q9H2H0 198 aa15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 TDRD15B5MCY1 1934 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-202ENST00000418600 TPPPO94811 219 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 AKR1C1Q04828 323 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZIC1Q15915 447 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR2T2Q6IF00 324 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNF425Q6IV72 752 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 CCBE1Q6UXH8 406 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 KIRREL1Q96J84 757 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 A0A1W2PS29 197 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR2M5A3KFT3 312 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 C1orf196B1AJZ1 125 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 KCNIP4Q6PIL6 250 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 BEST4Q8NFU0 473 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 FDCSPQ8NFU4 85 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR2AK2Q8NG84 335 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 UBE2FQ969M7 185 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 GNB3P16520 340 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 SERPINF1P36955 418 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 PEA15Q15121 130 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 CDONQ4KMG0 1287 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 KTI12Q96EK9 354 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 MBOAT4Q96T53 435 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 A0A1W2PQL4 384 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 INPP5JQ15735 1006 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNF658BQ4V348 819 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 ASCL5Q7RTU5 278 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 ANKRD13BQ86YJ7 626 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 RAB40AQ8WXH6 277 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 C10orf90Q96M02 699 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 NEUROG3Q9Y4Z2 214 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 TCRBV16S1A1N1A0A5B0 115 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 A8MV72 311 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 SOCS6O14544 535 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 Q499Y3 187 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 RBM45Q8IUH3 476 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 PELI3Q8N2H9 469 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 ANKRD9Q96BM1 317 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 OR51E2Q9H255 320 aa15.19■□□□□ 0.02
SYNGAP1-202ENST00000418600 MYH15Q9Y2K3 1946 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 HTR1FP30939 366 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 BRS3P32247 399 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 NKX6-1P78426 367 aaPredicted RBP15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 UBAC2Q8NBM4 344 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 C4orf45Q96LM5 186 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 APEX1P27695 318 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 LIPAP38571 399 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 ZNF767PQ75MW2 155 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 NANPQ8TBE9 248 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 LRRC29Q8WV35 223 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 FUNDC2Q9BWH2 189 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 SF3B5Q9BWJ5 86 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 C1QTNF3Q9BXJ4 246 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 CNOT2Q9NZN8 540 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 A0A1B0GV50 99 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 ATP6V1G1O75348 118 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 TFP02787 698 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 TMEM11P17152 192 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 PABPC1L2AQ5JQF8 200 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 C12orf45Q8N5I9 185 aaPredicted RBP15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 F8W036 122 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 ACOT8O14734 319 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 NAA40Q86UY6 237 aa15.18■□□□□ 0.02
SYNGAP1-202ENST00000418600 C17orf78Q8N4C9 275 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms