RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 OTOSQ8NHW6 89 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 ST7LQ8TDW4 575 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 RNF133Q8WVZ7 376 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 SPRYD4Q8WW59 207 aaPredicted RBP12.54□□□□□ -0.4
CHD1-202ENST00000414220 MNTQ99583 582 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 GABARAPL3Q9BY60 117 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 BPESC1Q9GZL8 116 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 NIPAL2Q9H841 368 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 USE1Q9NZ43 259 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 TMEFF2Q9UIK5 374 aaPredicted RBP12.54□□□□□ -0.4
CHD1-202ENST00000414220 N6AMT1Q9Y5N5 214 aa12.54□□□□□ -0.4
CHD1-202ENST00000414220 IGHV1-69-2A0A0G2JMI3 117 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 VWC2LB2RUY7 222 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 PHYHO14832 338 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 PPIHO43447 177 aaKnown RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 XRCC2O43543 280 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 PRKYO43930 277 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 ANXA2P07355 339 aaKnown RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 CFL1P23528 166 aaKnown RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 COL8A2P25067 703 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 NAA10P41227 235 aaPredicted RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 CX3CR1P49238 355 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 CDK5R2Q13319 367 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 HLXQ14774 488 aaPredicted RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 C12orf73Q69YU5 71 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 CYB5R2Q6BCY4 276 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 OR2T2Q6IF00 324 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 ZBTB49Q6ZSB9 765 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 USP51Q70EK9 711 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 MEPCEQ7L2J0 689 aaKnown RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 KRT77Q7Z794 578 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 PQLC1Q8N2U9 271 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 OR2Z1Q8NG97 314 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 OR10S1Q8NGN2 331 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 OR8J1Q8NGP2 316 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 TRUB1Q8WWH5 349 aaKnown RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 RFKQ969G6 155 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 EME1Q96AY2 570 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 CNN2Q99439 309 aaKnown RBP12.53□□□□□ -0.4
CHD1-202ENST00000414220 SMR3AQ99954 134 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 SLC22A4Q9H015 551 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 POFUT1Q9H488 388 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 IMPAD1Q9NX62 359 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 IL19Q9UHD0 177 aa12.53□□□□□ -0.4
CHD1-202ENST00000414220 GGT3PA6NGU5 568 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 ZSCAN5BA6NJL1 495 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 IQCF6A8MYZ5 107 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 CLDN25C9JDP6 229 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 LYNX1G3V0Z9 82 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 EI24O14681 340 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 TBX1O43435 398 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 SELENOFO60613 162 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 CDC14BO60729 498 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 ALPLP05186 524 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 CD55P08174 381 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 LYNX1P0DP58 116 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 SLC2A5P22732 501 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 ATP6V1E1P36543 226 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 SRP9P49458 86 aaKnown RBP12.52□□□□□ -0.41
CHD1-202ENST00000414220 RIPPLY3P57055 190 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
CHD1-202ENST00000414220 POU4F2Q12837 409 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 RIN1Q13671 783 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 GK2Q14410 553 aaPredicted RBP12.52□□□□□ -0.41
CHD1-202ENST00000414220 SNCBQ16143 134 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 TIGD6Q17RP2 521 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 TMEM249Q2WGJ8 235 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 NAA40Q86UY6 237 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 OR5AS1Q8N127 324 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 CBR4Q8N4T8 237 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 BBS1Q8NFJ9 593 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 OR52H1Q8NGJ2 320 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 ASB17Q8WXJ9 295 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 HPS1Q92902 700 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 RAB1CQ92928 201 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 IL4I1Q96RQ9 567 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 MROQ9BYG7 248 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 OR10A2Q9H208 303 aa12.52□□□□□ -0.41
CHD1-202ENST00000414220 WARS2Q9UGM6 360 aaKnown RBP12.52□□□□□ -0.41
CHD1-202ENST00000414220 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
CHD1-202ENST00000414220 CELSR1Q9NYQ6 3014 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 IFNL4K9M1U5 179 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 CD5LO43866 347 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 NCR1O76036 304 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 EPHA2P29317 976 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 DDOSTP39656 456 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 MZT1Q08AG7 82 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 TMED1Q13445 227 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 ZSCAN26Q16670 478 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 CCL17Q92583 94 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 PGAM5Q96HS1 289 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 RGCCQ9H4X1 137 aa12.51□□□□□ -0.41
CHD1-202ENST00000414220 ZNF275Q9NSD4 429 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms