RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MALLQ13021 153 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 HIST2H3PS2Q5TEC6 136 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 METTL11BQ5VVY1 283 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 DNM1P34Q6PK57 102 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 CORO6Q6QEF8 472 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 HIST2H3AQ71DI3 136 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 RHOUQ7L0Q8 258 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 PNLDC1Q8NA58 520 aaKnown RBP13.88□□□□□ -0.19
MRPL55-220ENST00000411464 DYRK2Q92630 601 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 FAM46AQ96IP4 442 aaKnown RBP13.88□□□□□ -0.19
MRPL55-220ENST00000411464 PKP2Q99959 881 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 RBM4BQ9BQ04 359 aaKnown RBP13.88□□□□□ -0.19
MRPL55-220ENST00000411464 TRIM15Q9C019 465 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 ANKRD19PQ9H560 264 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 UFSP2Q9NUQ7 469 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 ACOXLQ9NUZ1 547 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 AP3M1Q9Y2T2 418 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 CENPVL3A0A0U1RRI6 287 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 F5H5K5 113 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 GSTA4O15217 222 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 CD200P41217 278 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 CDKN2AP42771 156 aaKnown RBP13.87□□□□□ -0.19
MRPL55-220ENST00000411464 RPS6KA3P51812 740 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 RAD23AP54725 363 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 ECH1Q13011 328 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 GK2Q14410 553 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-220ENST00000411464 MPPED2Q15777 294 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 TAF9Q16594 264 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 MEP1BQ16820 701 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 CLEC12AQ5QGZ9 265 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 DPY19L2P2Q6ZN68 376 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 COLCA1Q6ZS62 124 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 PTCHD4Q6ZW05 846 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 SPRYD4Q8WW59 207 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-220ENST00000411464 WDFY2Q96P53 400 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-220ENST00000411464 PITX2Q99697 317 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 FN3KRPQ9HA64 309 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 RNF7Q9UBF6 113 aa13.87□□□□□ -0.19
MRPL55-220ENST00000411464 NOP16Q9Y3C1 178 aaKnown RBP13.87□□□□□ -0.19
MRPL55-220ENST00000411464 NOTCH1P46531 2555 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 CXCR6O00574 342 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 LCATP04180 440 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 PRSS12P56730 875 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 COX10Q12887 443 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 OR8G1Q15617 311 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 OR8B8Q15620 311 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 RSPO1Q2MKA7 263 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-220ENST00000411464 PRAMEF6Q5VXH4 476 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 SFRP4Q6FHJ7 346 aaPredicted RBP13.86□□□□□ -0.19
MRPL55-220ENST00000411464 ASPHD2Q6ICH7 369 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 CBLL1Q75N03 491 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 BOLLQ8N9W6 283 aaKnown RBP13.86□□□□□ -0.19
MRPL55-220ENST00000411464 LINC01006Q8NI28 216 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 SLC7A13Q8TCU3 470 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 SLCO4A1Q96BD0 722 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 HSH2DQ96JZ2 352 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 TSSK2Q96PF2 358 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 SLC22A4Q9H015 551 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 SRA1Q9HD15 236 aaKnown RBP13.86□□□□□ -0.19
MRPL55-220ENST00000411464 SAR1AQ9NR31 198 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 CMTM6Q9NX76 183 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 ARMCX1Q9P291 453 aa13.86□□□□□ -0.19
MRPL55-220ENST00000411464 IGHV1-69DA0A0B4J2H0 117 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 C3orf80F5H4A9 247 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 LGALS8O00214 317 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 ADAM20O43506 726 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 NDUFA2O43678 99 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 GPR137BO60478 399 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 TXNDC12O95881 172 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 IGHV1-69P01742 117 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 ACSM4P0C7M7 580 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
MRPL55-220ENST00000411464 MMP9P14780 707 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 MDH1P40925 334 aaKnown RBP13.85□□□□□ -0.19
MRPL55-220ENST00000411464 KRTAP10-3P60369 221 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 HSP90B2PQ58FF3 399 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 MRPL21Q7Z2W9 205 aaKnown RBP13.85□□□□□ -0.19
MRPL55-220ENST00000411464 ARPINQ7Z6K5 226 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 SCCPDHQ8NBX0 429 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 OR2AJ1Q8NGZ0 328 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 LHX4Q969G2 390 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 RSRC1Q96IZ7 334 aaKnown RBP13.85□□□□□ -0.19
MRPL55-220ENST00000411464 TBX15Q96SF7 602 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 ATF6BQ99941 703 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 TCF7L1Q9HCS4 588 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 KRCC1Q9NPI7 259 aaPredicted RBP13.85□□□□□ -0.19
MRPL55-220ENST00000411464 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 TRIM36Q9NQ86 728 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 CTSZQ9UBR2 303 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 AURKCQ9UQB9 309 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
MRPL55-220ENST00000411464 ENPP4Q9Y6X5 453 aa13.85□□□□□ -0.19
MRPL55-220ENST00000411464 TRAV38-1A0A0B4J264 116 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 A0A1W2PRQ8 180 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 DCTN6O00399 190 aa13.84□□□□□ -0.19
MRPL55-220ENST00000411464 CLPXO76031 633 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms