RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 GATA3P23771 443 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 FMO3P31513 532 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 RPS27P42677 84 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 SRP9P49458 86 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 GK2Q14410 553 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 PCK2Q16822 640 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 DNAL1Q4LDG9 190 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 TMEM155Q4W5P6 130 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 LYPD4Q6UWN0 246 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 LRRC28Q86X40 367 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 BHLHE23Q8NDY6 225 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 OR10AD1Q8NGE0 317 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 ST7LQ8TDW4 575 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 CANT1Q8WVQ1 401 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 MEGF10Q96KG7 1140 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 SIGLEC11Q96RL6 698 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 FEVQ99581 238 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 TMEM100Q9NV29 134 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 RIIAD1A6NNX1 92 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 H0YL77 283 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 TMEM178BH3BS89 294 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 M0R135 149 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 GYG2O15488 501 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 MLNRO43193 412 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 OTX1P32242 354 aaPredicted RBP16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 ENTPD1P49961 510 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 BLVRAP53004 296 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 BTG1P62324 171 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 SRSF2Q01130 221 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 SCGB2A2Q13296 93 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 TEX30Q5JUR7 227 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 C1orf229Q6ZS94 237 aaPredicted RBP16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNF771Q7L3S4 317 aaPredicted RBP16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 DCXRQ7Z4W1 244 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 KLHL36Q8N4N3 616 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 SPICQ8N5J4 248 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNF511Q8NB15 262 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 TEX47Q8TBZ9 253 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 SLCO4A1Q96BD0 722 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNF799Q96GE5 643 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 TMPRSS13Q9BYE2 586 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 CMC2Q9NRP2 79 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 PCDHB10Q9UN67 800 aa16.52■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNF593O00488 134 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 GNGT2O14610 69 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 FOXH1O75593 365 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 AVPP01185 164 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 GYPBP06028 91 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 SPARCP09486 303 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 PSKH1P11801 424 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 ZNF3P17036 446 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 GRK5P34947 590 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 RBMXP38159 391 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 MMP16P51512 607 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 ZMYND11Q15326 602 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 DCAF12L2Q5VW00 463 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 DRAM2Q6UX65 266 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 PGAP1Q75T13 922 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 C19orf24Q9BVV8 132 aa16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 PATZ1Q9HBE1 687 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-209ENST00000409543 WNK2Q9Y3S1 2297 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 PPIAL4EA0A075B759 164 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 PPIAL4CA0A0B4J2A2 164 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 PPIAL4DF5H284 164 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 F5H5P2 479 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 H3BN98 237 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 PPIAL4FP0DN26 164 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 CLUP10909 449 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 MDH2P40926 338 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 SLC6A9P48067 706 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 LCN2P80188 198 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 MRPL21Q7Z2W9 205 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 TMEM179BQ7Z7N9 219 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 OR6K6Q8NGW6 343 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 SLC7A6OSQ96CW6 309 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 SLAMF6Q96DU3 332 aa16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 PDP1Q9P0J1 537 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-209ENST00000409543 LOC105371242A0A075B767 164 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 A0A0A6YYJ9 748 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 ZFP36P26651 326 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 PRSS12P56730 875 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 FLOT2Q14254 428 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 ZNF181Q2M3W8 571 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 SNAI3Q3KNW1 292 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 LINC01590Q5TEZ4 76 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 C1QL2Q7Z5L3 287 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 MUC20Q8N307 709 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 CELF2-AS1Q8N7Q2 184 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 ZNF420Q8TAQ5 688 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 SPRYD4Q8WW59 207 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 KCNJ15Q99712 375 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 COPS4Q9BT78 406 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 OCEL1Q9H607 264 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 YY1AP1Q9H869 796 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 CENPMQ9NSP4 180 aa16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 POLR3KQ9Y2Y1 108 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-209ENST00000409543 CD300LBA8K4G0 201 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 ZNF878C9JN71 531 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 HLA-DPB1P04440 258 aa16.48■□□□□ 0.23
TSPAN4-209ENST00000409543 CPT2P23786 658 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms