RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LNX2Q8N448 690 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 KLHL36Q8N4N3 616 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 SPICQ8N5J4 248 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 SEMA6DQ8NFY4 1073 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 OR2T4Q8NH00 348 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 OR2T29Q8NH02 315 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 OR4Q3Q8NH05 313 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 TSSK6Q9BXA6 273 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 HCAR1Q9BXC0 346 aa16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 PATZ1Q9HBE1 687 aaKnown RBP16.22■□□□□ 0.19
SMARCB1-204ENST00000407422 GYPBP06028 91 aa16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 MICAQ29983 383 aa16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 SLCO4A1Q96BD0 722 aa16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 CCDC124Q96CT7 223 aaKnown RBP16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 RBM4Q9BWF3 364 aaKnown RBP16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 REEP1Q9H902 201 aa16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 ARMC1Q9NVT9 282 aa16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 KCNG2Q9UJ96 466 aa16.21■□□□□ 0.19
SMARCB1-204ENST00000407422 NBEAL1Q6ZS30 2694 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 FOXH1O75593 365 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 CYB5R3P00387 301 aaPredicted RBP16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 GATA3P23771 443 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 SLC6A9P48067 706 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 SCGB2A2Q13296 93 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 CRMP1Q14194 572 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 FAM98BQ52LJ0 330 aaKnown RBP16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 MOGAT3Q86VF5 341 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 DGCR6LQ9BY27 220 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 TMEM100Q9NV29 134 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 TAS2R1Q9NYW7 299 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 COMMD3-BMI1R4GMX3 469 aa16.2■□□□□ 0.18
SMARCB1-204ENST00000407422 A0A0A6YYJ9 748 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 A0A1B0GWJ7 208 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 C5orf63A6NC05 138 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 TRAPPC2LH3BP13 241 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 M0R135 149 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 CLUP10909 449 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 MDH2P40926 338 aaKnown RBP16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 PMELP40967 661 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 SRP9P49458 86 aaKnown RBP16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 TPTEP56180 551 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 SNAI3Q3KNW1 292 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 TEX29Q8N6K0 151 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF511Q8NB15 262 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 NANPQ8TBE9 248 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 ASB9Q96DX5 294 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF799Q96GE5 643 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 DDX28Q9NUL7 540 aaKnown RBP16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 PRPF19Q9UMS4 504 aaKnown RBP16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 F5H0A9 414 aaPredicted RBP16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 MALLQ13021 153 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 MAB21L1Q13394 359 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 PGAP1Q75T13 922 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 DCXRQ7Z4W1 244 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 DEFB108BQ8NET1 73 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 OR2T33Q8NG76 320 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF418Q8TF45 676 aaPredicted RBP16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 SPTSSAQ969W0 71 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 NIPSNAP1Q9BPW8 284 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 NMNAT2Q9BZQ4 307 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 TMEM165Q9HC07 324 aa16.19■□□□□ 0.18
SMARCB1-204ENST00000407422 PPIAL4EA0A075B759 164 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 PPIAL4CA0A0B4J2A2 164 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 CEACAM18A8MTB9 384 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 PPIAL4DF5H284 164 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 ACOT8O14734 319 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 FSHBP01225 129 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 SPARCP09486 303 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 PPIAL4FP0DN26 164 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 SPI1P17947 270 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF92Q03936 586 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 FAM201AQ5SY85 155 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 OR10G2Q8NGC3 310 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 OR2AE1Q8NHA4 323 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 C22orf15Q8WYQ4 148 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 SLC6A7Q99884 636 aa16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 POLR3KQ9Y2Y1 108 aaPredicted RBP16.18■□□□□ 0.18
SMARCB1-204ENST00000407422 IFNL4K9M1U5 179 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 RAP2AP10114 183 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 FMO3P31513 532 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 OTX1P32242 354 aaPredicted RBP16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 SLC25A1P53007 311 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 MRPL21Q7Z2W9 205 aaKnown RBP16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 ADGRG5Q8IZF4 528 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 MUC20Q8N307 709 aaPredicted RBP16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 LRGUKQ96M69 825 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 THTPAQ9BU02 230 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 CHID1Q9BWS9 393 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 BAIAP2Q9UQB8 552 aa16.17■□□□□ 0.18
SMARCB1-204ENST00000407422 ZNF593O00488 134 aaPredicted RBP16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 WNT2P09544 360 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 ENTPD1P49961 510 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 HILS1P60008 231 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 PCK2Q16822 640 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 USP43Q70EL4 1123 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 IQCF1Q8N6M8 205 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 OR6K6Q8NGW6 343 aa16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 SPRYD4Q8WW59 207 aaPredicted RBP16.16■□□□□ 0.18
SMARCB1-204ENST00000407422 SLAMF6Q96DU3 332 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms