RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 CD53P19397 219 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 AGAP20933 346 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 GADD45AP24522 165 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 GRNP28799 593 aaKnown RBP17.76■□□□□ 0.43
CHKB-201ENST00000406938 TBC1D28Q2M2D7 210 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 C1QTNF12Q5T7M4 302 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 PAQR4Q8N4S7 273 aaPredicted RBP17.76■□□□□ 0.43
CHKB-201ENST00000406938 ZNF676Q8N7Q3 588 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 FAM169BQ8N8A8 192 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 OR8B12Q8NGG6 310 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 LRRC46Q96FV0 321 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 COMMD4Q9H0A8 199 aa17.76■□□□□ 0.43
CHKB-201ENST00000406938 RBM38Q9H0Z9 239 aaKnown RBP17.76■□□□□ 0.43
CHKB-201ENST00000406938 C5orf63A6NC05 138 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 PYCARD-AS1I3L0S3 204 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 GPRIN2O60269 458 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 CECR9P0C854 216 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 SNAI3Q3KNW1 292 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 XKRXQ6PP77 449 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 SEZ6L2Q6UXD5 910 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 SLC16A12Q6ZSM3 486 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 ELMOD2Q8IZ81 293 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 ZNF808Q8N4W9 903 aaPredicted RBP17.75■□□□□ 0.43
CHKB-201ENST00000406938 OR13C5Q8NGS8 318 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 RGP1Q92546 391 aaPredicted RBP17.75■□□□□ 0.43
CHKB-201ENST00000406938 PGAM5Q96HS1 289 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 OR51E2Q9H255 320 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 NPAP1Q9NZP6 1156 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 ZNF319Q9P2F9 582 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 CEPT1Q9Y6K0 416 aa17.75■□□□□ 0.43
CHKB-201ENST00000406938 DIDO1Q9BTC0 2240 aaKnown RBP17.74■□□□□ 0.43
CHKB-201ENST00000406938 IGHV1-18A0A0C4DH31 117 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 SMIM31A0A1B0GVY4 71 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 A6NHS1 94 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 CLDN14O95500 239 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 NR4A1P22736 598 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 PSMA1P25786 263 aaKnown RBP17.74■□□□□ 0.43
CHKB-201ENST00000406938 ZNF83P51522 516 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 TFF3Q07654 80 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 ANKRD13BQ86YJ7 626 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 RDH10Q8IZV5 341 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 RPL3LQ92901 407 aaKnown RBP17.74■□□□□ 0.43
CHKB-201ENST00000406938 DCLRE1CQ96SD1 692 aaKnown RBP17.74■□□□□ 0.43
CHKB-201ENST00000406938 SLC24A3Q9HC58 644 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 ENPP5Q9UJA9 477 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 STUB1Q9UNE7 303 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 ZNF281Q9Y2X9 895 aa17.74■□□□□ 0.43
CHKB-201ENST00000406938 ACOD1A6NK06 481 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 TBX1O43435 398 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 LCATP04180 440 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 UBCP0CG48 685 aaKnown RBP17.73■□□□□ 0.43
CHKB-201ENST00000406938 PPP3CBP16298 524 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 PAX7P23759 505 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 RPS11P62280 158 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHKB-201ENST00000406938 FABP5Q01469 135 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 INSL4Q14641 139 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 OR52H1Q8NGJ2 320 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 ZC3HAV1LQ96H79 300 aaKnown RBP17.73■□□□□ 0.43
CHKB-201ENST00000406938 C1QTNF5Q9BXJ0 243 aa17.73■□□□□ 0.43
CHKB-201ENST00000406938 LOC107986453A0A1B0GWG9 222 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 CCDC160A6NGH7 325 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 H3BSH0 61 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 M0R1B8 84 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 P2RY10O00398 339 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 GABARAPO95166 117 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 THBDP07204 575 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 WNT5AP41221 380 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 CRYBB2P43320 205 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 GFOD2Q3B7J2 385 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 TIMM50Q3ZCQ8 353 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 YIF1BQ5BJH7 314 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 FOXB2Q5VYV0 432 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 CD200R1LQ6Q8B3 271 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 ZNF704Q6ZNC4 412 aaPredicted RBP17.72■□□□□ 0.43
CHKB-201ENST00000406938 COLCA1Q6ZS62 124 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 MS4A15Q8N5U1 240 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 OR10AC1Q8NH08 325 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 TRMT61AQ96FX7 289 aaKnown RBP17.72■□□□□ 0.43
CHKB-201ENST00000406938 CHCHD6Q9BRQ6 235 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 MED18Q9BUE0 208 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 CDH20Q9HBT6 801 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 LOC100506127A0A0U1RQW1 187 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 AIREO43918 545 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 GPX5O75715 221 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 RGS9O75916 674 aaPredicted RBP17.72■□□□□ 0.43
CHKB-201ENST00000406938 HLA-DPB1P04440 258 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 ISG15P05161 165 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 SORDQ00796 357 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 SNTB1Q13884 538 aaKnown RBP17.72■□□□□ 0.43
CHKB-201ENST00000406938 TRAM1Q15629 374 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 C3orf36Q3SXR2 165 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 SSX8Q7RTT4 187 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 WFDC8Q8IUA0 241 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 ZNF101Q8IZC7 436 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 OR51A4Q8NGJ6 313 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 OR1J2Q8NGS2 313 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 OR51E1Q8TCB6 317 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 ISOC1Q96CN7 298 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 WFIKKN1Q96NZ8 548 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 OR10A2Q9H208 303 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms