RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
PMS2-204ENST00000406569 FARSAQ9Y285 508 aaKnown RBP12.13□□□□□ -0.47
PMS2-204ENST00000406569 RPH3AQ9Y2J0 694 aaPredicted RBP12.13□□□□□ -0.47
PMS2-204ENST00000406569 RALGAPA1Q6GYQ0 2036 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 ARID1BQ8NFD5 2236 aaPredicted RBP12.12□□□□□ -0.47
PMS2-204ENST00000406569 EFSO43281 561 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 SSX5O60225 188 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 STK17BO94768 372 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 DUS4LO95620 317 aaKnown RBP12.12□□□□□ -0.47
PMS2-204ENST00000406569 ERCC1P07992 297 aaPredicted RBP12.12□□□□□ -0.47
PMS2-204ENST00000406569 CHRM2P08172 466 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 RAB3AP20336 220 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 MSX1P28360 303 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 LAP3P28838 519 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 CASRP41180 1078 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 FBXW4P57775 412 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 FOXF1Q12946 379 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 SQSTM1Q13501 440 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 THEM4Q5T1C6 240 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 C3orf33Q6P1S2 294 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 WDR74Q6RFH5 385 aaPredicted RBP12.12□□□□□ -0.47
PMS2-204ENST00000406569 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 TMPRSS9Q7Z410 1059 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 ANKRD37Q7Z713 158 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 HOGA1Q86XE5 327 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 OR10H5Q8NGA6 315 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 OR52H1Q8NGJ2 320 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 OR5D14Q8NGL3 314 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 OR10R2Q8NGX6 335 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 PPP1R1CQ8WVI7 109 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 CMBLQ96DG6 245 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 VRK1Q99986 396 aaPredicted RBP12.12□□□□□ -0.47
PMS2-204ENST00000406569 FGF21Q9NSA1 209 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 CENPMQ9NSP4 180 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 SRPK3Q9UPE1 567 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
PMS2-204ENST00000406569 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 OR2AT4A6NND4 320 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 SYT7O43581 403 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 EFNA2O43921 213 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 GSTP1P09211 210 aaKnown RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 GLB1P16278 677 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 TAS2R31P59538 309 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 ZNF239Q16600 458 aaKnown RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 NKPD1Q17RQ9 610 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 RHBDD2Q6NTF9 364 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 GVQW1Q8N7I0 195 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 RELL2Q8NC24 303 aaPredicted RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 OR10K1Q8NGX5 313 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 STT3BQ8TCJ2 826 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 MRGPRX4Q96LA9 322 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 C1orf147Q96MC9 270 aaPredicted RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 PHB2Q99623 299 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 MS4A7Q9GZW8 240 aaPredicted RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 ZNF768Q9H5H4 540 aaKnown RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 LMAN1LQ9HAT1 526 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 MYEF2Q9P2K5 600 aaKnown RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 VSTM2BA6NLU5 285 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 GP1BAP07359 652 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 SRFP11831 508 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 CNR1P21554 472 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 CCL1P22362 96 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 DLSTP36957 453 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 P2RY4P51582 365 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 ATP1B3P54709 279 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 BIDP55957 195 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 FOXK1P85037 733 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 KCNMB1Q16558 191 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 VAX1Q5SQQ9 334 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 FAM122CQ6P4D5 195 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 C16orf47Q6ZP98 133 aaPredicted RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 RABEPKQ7Z6M1 372 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 CD163Q86VB7 1156 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 OR5AS1Q8N127 324 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 FBXW5Q969U6 566 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 C5orf34Q96MH7 638 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 FOXQ1Q9C009 403 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 LPAR5Q9H1C0 372 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 DUSP15Q9H1R2 295 aaPredicted RBP12.11□□□□□ -0.47
PMS2-204ENST00000406569 TMEM185BQ9H7F4 350 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 PTGES2Q9H7Z7 377 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 C12orf4Q9NQ89 552 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 HRH3Q9Y5N1 445 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
PMS2-204ENST00000406569 A0A0B4J2A0 478 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 MPTX1A8MV57 137 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 ZNF878C9JN71 531 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 F8VVB4 439 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 F8VWA3 439 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 CCSO14618 274 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 TSPAN4O14817 238 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 ATF4P18848 351 aaPredicted RBP12.1□□□□□ -0.47
PMS2-204ENST00000406569 HRH1P35367 487 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 PPIAP62937 165 aaKnown RBP12.1□□□□□ -0.47
PMS2-204ENST00000406569 IL13RA1P78552 427 aa12.1□□□□□ -0.47
PMS2-204ENST00000406569 TAF13Q15543 124 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms